Quercus lobata (valley oak): 115967660
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Entry
115967660 CDS
T07350
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
115967660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qlo03400
]
115967660
DNA repair and recombination proteins [BR:
qlo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
115967660
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
HSBP1
Motif
Other DBs
NCBI-GeneID:
115967660
NCBI-ProteinID:
XP_030942663
UniProt:
A0A7N2MX85
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Position
11:complement(22845666..22849503)
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AA seq
654 aa
AA seq
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MIMEEGREKGGGKVLSLIEKATNSTAAEVDPRLLKAIKSVVRYSDMELRLAANTLLDLMK
RDHSQVRYLTLLIIDELFMRSKLFRSILVDNLDQLLSLSVGFRRTLPLPAPPAVASILRS
KAIEFLEKWNSSFGIHYRQLRLGFDYLKNTLKLQFPNLQANAARIQQERAERERRSREIL
LKKFEMFKDNFSSIKEEIMSTIDEIGECLDIVRTNEEFMPLPPADDEYFEEFRSSELLQI
RLNTLKEGEKVHENSDNKVVFDALRELYKLLETKHLVAVQEWISVLLRVEVADNRFRDSA
LKELIDIQNRLKSVKKKCEESGCALPNTANRDGEEDDFWEEGKIGSLESERSTVPNKQDE
AFSMKVTPNKFKNRTPESSKKDCNDNEILSAEGGETNLDPLRSKLLAEAPVMNWGSFLDN
WGSNRKVLTNQRGLELESHWGRVDYDTVIPAEKMPELNVHATLYEEQQTDIQPCRAPLSK
GGLCQRRDLRVCPFHGPIIPRDDEGKPLNQNSLKEEISLDLGIDSIEQLAKQAVKNVRAR
DKEVSNKREIDKKSLKRAKLAKIREHNETVLRDAALTSTSRSASIGEDMGVADGEKPSAR
NKKETLSSMLHKKVTPKDRIAQRLLNSRAKDSTTRQLTLGEDANYREAFPNQWQ
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgataatggaagaggggagagagaaaggaggagggaaggtgttgagtctgatagagaag
gcgaccaactccacggctgctgaggtggacccacgtctccttaaggccataaaatccgta
gtccgctattcggatatggaactacgacttgctgccaatacccttttggatctcatgaag
cgcgatcattctcaggtaaggtacctaacactcctaataattgacgaactgttcatgcgt
tcaaagcttttcagaagcattcttgttgacaacttggatcagttgctgagtttgagtgtt
gggttcagaagaactctgcctctcccagctcctcctgctgtcgcttctattttgcgctct
aaggcaatcgaattcttggagaagtggaactcttcctttgggattcattacaggcagctc
agattagggtttgattaccttaaaaacaccctcaagttgcagtttcctaatctacaggcc
aatgcagctcggattcagcaggagagagcagaacgggaaaggcggtcaagagagattttg
ctaaagaaatttgaaatgttcaaggacaatttctcatctattaaggaagagatcatgtct
accattgacgagattggggaatgcttagacatagtccgtacaaatgaggaatttatgcct
ctgcctcctgcagatgatgaatatttcgaagagtttcgttcttctgaactgctgcaaatc
cgtctcaacactttaaaagaaggggaaaaggttcacgagaacagtgacaataaagtggtt
tttgatgcattaagggagctgtacaagcttctagagacaaagcatttggttgcagttcaa
gaatggatctctgttcttctaagggttgaagtggcagacaacaggttcagagattccgct
ttaaaggagttaattgatatccaaaatcgtctcaaatcagtgaagaagaagtgtgaagaa
tcaggttgtgctcttccaaacactgcaaatcgtgatggagaagaagatgatttctgggag
gagggtaagattggatcacttgagagtgagagatctactgtgcccaataagcaagatgaa
gctttttccatgaaagtaacacctaataagttcaaaaatagaactcctgaaagcagtaaa
aaagattgtaatgacaatgagattctcagtgctgaaggcggtgaaaccaatttggaccca
ttaagaagtaagcttctggctgaagctcctgtgatgaattggggttctttcttggataac
tggggttcaaacaggaaggttttgactaaccagcggggattggagcttgaaagtcactgg
ggtagggtggattatgacacggttattccagctgagaaaatgcctgaactgaatgtacat
gcaactctttatgaagagcagcaaactgacattcaaccctgcagggctcctttgagcaaa
ggggggctttgtcagagaagagacctgagagtttgtccatttcatggacctattatacct
cgagatgatgaaggaaagccactcaatcagaactctttaaaagaagagatatctcttgat
ttggggattgattccattgagcagttagcaaaacaagctgtgaagaatgttcgtgcgaga
gataaagaagtatcaaataagagagaaattgataaaaagtcactgaagcgtgcaaaactt
gcaaaaattcgggagcacaatgaaacagttctaagggatgctgccttgacatcaacttca
agatctgcatctattggagaagatatgggggtggctgatggtgagaaaccgtcagccaga
aacaagaaggaaacactctcatccatgctgcacaagaaagtgacaccaaaagataggata
gctcagaggcttttgaattcacgggcaaaggattcaacaacaagacagctcacattgggt
gaagatgcaaattaccgagaagccttcccaaatcaatggcaatga
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