Quercus lobata (valley oak): 115967868
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Entry
115967868 CDS
T07350
Name
(RefSeq) ubiquitin fusion degradation protein 1 homolog
KO
K14016
ubiquitin fusion degradation protein 1
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115967868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
qlo03009
]
115967868
Ribosome biogenesis [BR:
qlo03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
115967868
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Gene cluster
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
DS
Motif
Other DBs
NCBI-GeneID:
115967868
NCBI-ProteinID:
XP_030942882
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Position
11:complement(46468244..46472761)
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AA seq
319 aa
AA seq
DB search
MFFDGYGYHGTSFEQTYRCYPASFIEKPQLESGDKIIMPPSALDRLASLHIDYPMLFELR
NASAERVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDIVRVKNVTLPKGTYVKLQPHTK
DFLDISNPKAILETTLRNFSCLTSGDSIMVAYNNKKYYIDIIETKPANAISIIETDCEVD
FAPPLDYKEPEKPIAPVPLGKAPAEEAPAETEPKFSPFTGSGRRLDGKPLNYQPPSVAPS
RSKDKQPNVANGNAKPSAGSSSQSTNRQAQGKLVFGSNVSRTPKDTPKEPVKETKQEQPS
KSEEPKFQAFSGKKYSLRG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcgatggttatgggtatcacgggacatcgtttgagcagacatatcgatgttac
ccggcttcatttattgaaaagccacaacttgaaagtggtgataaaattataatgcctcct
tcagccttggaccgccttgcatctttacatattgattatccaatgttgtttgagcttcgg
aatgcttctgctgagcgggtttctcattgtggcgttcttgagttcattgctgaagaaggc
atgatctatatgccttactggatgatggagaacatgctcttgcaagagggggatattgtg
cgagtgaaaaatgttactcttccaaagggaacatatgtcaaattgcaaccgcacacaaag
gactttttggatatttcaaacccaaaagctatcttagagacaacattaaggaacttttct
tgcttaacctctggggatagtattatggtggcatataacaacaagaagtattacatagat
ataatagaaacaaaacctgctaatgcaataagtatcattgagacagactgtgaggtggac
tttgcacctcccctcgattacaaggaacctgaaaagcctattgcacctgttcctctaggc
aaggcaccagctgaagaggctccagctgaaactgaacctaaattcagccctttcactgga
tcagggagacgcttggacgggaaacctttgaattaccagcctccatcagttgctccctca
cgatccaaagacaagcaacctaatgttgccaatggtaatgcaaagccttctgcaggatct
agttcacaaagcaccaatcgtcaggctcagggaaagcttgtgtttggatcaaatgtaagc
cgcactcctaaagatacaccaaaggaacctgtaaaagagactaaacaagagcagccctca
aagagtgaagagccaaagttccaggctttttctgggaaaaagtactcattgaggggttga
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