Quercus lobata (valley oak): 115968072
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Entry
115968072 CDS
T07350
Name
(RefSeq) cullin-4-like
KO
K10609
cullin 4
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03420
Nucleotide excision repair
qlo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115968072
09124 Replication and repair
03420 Nucleotide excision repair
115968072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qlo04121
]
115968072
03400 DNA repair and recombination proteins [BR:
qlo03400
]
115968072
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
qlo04147
]
115968072
Ubiquitin system [BR:
qlo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
115968072
DNA repair and recombination proteins [BR:
qlo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
115968072
TCR (transcription coupled repair) factors
Cul4-CSA complex
115968072
Exosome [BR:
qlo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115968072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
115968072
NCBI-ProteinID:
XP_030943130
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Position
11:52225272..52240127
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AA seq
834 aa
AA seq
DB search
MSLPTKRSATSTTSNNNNSSSSSNPNPNPTSPPPFSAMKKAKSQAAALDPKNGLHHQDFN
NSNNNNSDVVFDPSSMSVDDDFKPHDSSAPSPSPAPPRAVAANLSRKKAQPPQPPKKLVI
KLLKAKPTLPANFEEDTWAKLKSAISAIFLKQPDPIDSEILYQAVNDLCLHKLGGNLYQR
IEKECEAHISEALQSLFGQSPDLVVFLSLVERCWQDLCDQMLLIRGIALYLDRTYVKQTP
NVRSLWDMGLQLFRKHLSLSPEVEHKTVTGLLRMIQSERLGEAVDRTLLNHLLKMFTALG
IYAESFEKPFLECTSEFYAAEGMKFMQQSDVPDYLKHVETRLHEEHERCVLYLDACTRKP
LIATAEKQLLERHISAILDKGFMMLMDGHRIEDLQRMYSLFSRVNALESLRQALSSYIRR
TGQGIVMDEEKDKDMVSSLLEFKASLDTIWEESYSKNDAFCNTIKDAFEHLINLRQNRPA
ELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKS
ASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIELSV
HVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKG
KKELAVSLFQTVVLMLFNDAERLSFQDIKDSTGIEDKELRRTLQSLACGKVRVLQKMPKG
RDVEDDDSFVFNDVFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMK
TRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgtctctccccaccaaacgctcagccacatccaccacctccaacaacaacaactcttct
tcttcttctaatcccaaccccaaccccacatctcctcctcccttctccgccatgaaaaag
gccaaatcccaagccgcagctctcgaccccaaaaacggtctccaccaccaagacttcaac
aacagcaacaacaacaacagcgatgtcgttttcgacccctcttccatgtccgtggacgac
gatttcaagccccacgactcctccgccccttccccttcgccagctccgcctcgcgccgtc
gccgccaatttgtccagaaagaaagcccagccgcctcagccccctaagaagcttgtcatc
aagctcctcaaagcgaaaccaacactgcctgcaaattttgaagaggatacgtgggcaaag
ctgaaatctgctatatctgctatatttttaaagcaacccgatcctattgactcagagata
ctttatcaggctgttaatgacctttgtctacacaaattggggggaaatctttatcaacgg
attgagaaggagtgtgaagcgcacatctctgaagcattgcaatccttgtttggccaaagc
ccagatttggtggtttttctgtcacttgttgagagatgctggcaggatctttgtgaccaa
atgttgttgattcgtggtatagccttgtatctagatagaacatatgtaaagcaaacacct
aatgtgcgatcattgtgggacatgggattgcagcttttccgcaaacatctttcattatct
ccagaagttgagcacaaaactgtcacaggccttttaagaatgattcagagcgaaagatta
ggcgaagcagtggataggactctccttaaccatctcttgaagatgtttactgcactagga
atttatgcagaaagctttgaaaagccatttcttgagtgcacgtctgagttttatgctgct
gaaggcatgaaattcatgcagcaatcagatgttccagattatctgaagcatgtagagaca
aggttgcatgaggaacatgaaagatgtgtactctacctggatgcttgtacaagaaaacca
ctaatagcaactgcagaaaagcaactccttgaacgccacatatctgccattcttgataag
ggtttcatgatgctaatggatgggcaccgtattgaggaccttcagaggatgtattcactg
ttttcaagggtcaatgcgcttgaatcactaaggcaagcgcttagctcatacatccgcaga
actgggcagggcattgtcatggatgaagagaaagacaaagatatggtttcatccctttta
gaatttaaggcttcgcttgatacaatatgggaagaaagctattccaagaatgatgcattt
tgcaacaccattaaggatgcatttgagcatctcatcaatcttcgtcagaaccgacctgct
gagctgattgcaaaatttctggatgaaaagcttcgtgctgggaataagggtacttccgag
gaagaattggagggtactcttgataaagttttggttttattcaggtttattcagggcaag
gatgtgtttgaagcattttataagaaggatcttgcaaaaaggctgcttttgggaaagagt
gcttccattgatgcggagaaatcgatgatctctaagctaaagacagagtgtggcagccaa
tttacaaacaaacttgaaggaatgttcaaagacattgaattatcaaaagaaataaatgaa
tccttcaaacaatcatcccaggccaggacaaaactcccatctgggattgagttgagtgta
catgttttaacaacagggtactggccaacatatccgcccatggatgttagacttcctcat
gaattgaatgtctaccaggacattttcaaggagttctacttgagcaagtacagtgggagg
cgcttaatgtggcaaaattcattaggtcattgtgtgttaaaagctgaatttcctaaaggt
aaaaaggagctggcagtttctctgtttcagactgttgttttgatgctctttaatgatgct
gagaggctaagctttcaagatattaaggactccactggaattgaggataaggaactaagg
aggactttgcagtcccttgcatgtggaaaagttcgagtcctacaaaagatgcccaagggt
agggacgtagaggatgatgattcatttgtgttcaacgatgtatttactgctcctctttac
cgtataaaggtaaatgcaatacagatgaaggaaacagtggaggagaatacaagcaccact
gaacgagtttttcaggaccgtcaatatcaggttgatgctgctattgtacgaataatgaag
actagaaaagtgctcagtcacacacttctgataactgaactcttccaacagctcaaattt
ccaataaagccagctgatttgaagaaacggattgaaagccttatcgacagggagtatcta
gagcgtgacaagaacaacccgcagatatacaattacttggcataa
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