Quercus lobata (valley oak): 115968079
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Entry
115968079 CDS
T07350
Name
(RefSeq) eukaryotic initiation factor 4A-2-like
KO
K03257
translation initiation factor 4A
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115968079
03012 Translation factors [BR:
qlo03012
]
115968079
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
qlo04147
]
115968079
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115968079
mRNA cycle factors
Stress granule specific factors
115968079
Translation factors [BR:
qlo03012
]
Eukaryotic type
Initiation factors
eIF-4
115968079
Exosome [BR:
qlo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115968079
Exosomal proteins of bladder cancer cells
115968079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
WD40
WD40_Prp19
WDR55
EIF3I
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
ResIII
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
AAA_22
Beta-prop_WDR75_1st
Beta-prop_Nup120_160
CMS1
Motif
Other DBs
NCBI-GeneID:
115968079
NCBI-ProteinID:
XP_030943146
LinkDB
All DBs
Position
2:62087255..62104314
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AA seq
800 aa
AA seq
DB search
MCGDARNWDEDAYRESILKEREIQTRTVFRTVWAPAQNPNPNPETIVAASSDGSIASYSI
SSCISKLQSFRNTKAQHLLVAEPDCFVQGHDGPAYDIKFYGDGEDALLLSCGDDGRIRGW
RWKDFTNSDVPITLQGKQMKPVLDLVNPQHKGPWGALSPIPENNAIAVNIQGGSIFSASG
DSCAYCWDVETGKLKVVFKGHSDYLHCIVARNSANQIITGSEDGTARIWDCKSGKCIQVI
DPAENTKLKGFFSCVSCITLDGSESWLACGSGQCLSIWNLPASECISRTSTRASVQDVLF
DDNQILAVGAEPLLCRFDMNGVILSQIQCAPPSAFSVSLHPSGVTAVGGYGGLVDVISQF
GSHLCTLLHTTKTNTTTPLFYFTFHRSTVMAAPEGSQFDARQFDAKMDELLSVDAQDFFT
SYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT
FCSGVLQQLDYSVTECQALVLAPTRELAQQIEKVMRALGDYLGVRVHACVGGTSVREDQR
ILSSGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSK
IQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDL
YETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVL
ITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLFD
IQKFYNVVVEELPSNVADLL
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgtgcggagacgcgaggaactgggacgaagatgcatacagagaaagcatactgaaggag
agggagattcaaactcgaactgttttcaggaccgtttgggcacccgctcaaaaccctaac
cctaacccggaaaccattgtcgccgcctccagcgatggatcgatcgcctcctactccatc
tcctcctgcatctccaagctccaaagttttaggaatacaaaggcacaacacttgttagtg
gctgaacccgattgctttgttcaagggcacgatggacctgcttatgatatcaaattctat
ggtgacggtgaagatgccttgttactaagttgtggtgatgatggtcggattcgaggatgg
aggtggaaggattttacaaattcagacgtgcccattacattgcaagggaagcaaatgaag
ccagtacttgacctggtgaatccccaacataaaggtccttggggtgctctttctccaatt
cctgaaaataatgccattgctgttaacatacagggaggatctattttttcagcttctggt
gattcttgtgcgtattgctgggatgtggaaacgggtaaactcaaagtagtttttaagggg
cattcagactacttgcattgtatagttgcccgaaactctgccaaccagatcataactggt
tcagaggatgggactgcacggatatgggattgcaaaagtggaaagtgtattcaagtaatt
gatccagcagagaacactaagttgaaaggtttcttctcatgcgttagttgcattactctt
gatggaagcgaaagctggttggcttgtggcagtggtcagtgtttatccatttggaatctt
cctgcttctgagtgcatttcaaggacttcaactcgtgcttctgtgcaggatgtattattt
gatgacaatcaaattttggctgttggagcagaacctcttctgtgtcgttttgacatgaat
ggggtgattctttcacaaatacaatgtgctcctccatcagcattctctgtctccctacat
ccgtccggggttacagcagttggaggttatggaggtcttgtagatgttatctcacagttt
ggaagccacctttgcacattacttcacacaacaaaaaccaatactactacccctctcttc
tacttcacttttcaccgatcaacagtcatggcggcaccagaggggtcacaatttgatgct
cgtcagtttgatgctaaaatggatgagttactttcagttgatgctcaggacttcttcaca
tcatatgatgaggtttatgatagttttgatgctatgggattgcaagagaatcttctgagg
gggatttatgcttatggtttcgaaaaaccctctgctattcagcaaaggggaattgtaccc
ttctgtaagggtcttgatgttattcaacaggctcaatctggaactggaaagacagcaact
ttctgctctggtgttttgcaacaacttgactatagtgtgacggaatgccaagctttggtc
ctggcacccactagagagcttgctcaacagattgagaaggtgatgcgggcacttggagac
tatcttggtgtaagagtacatgcttgtgttggtggaacaagtgttcgtgaagatcaacgc
attctgtctagtggggttcatgttgttgttggtactcctggtcgtgtgtttgatatgctg
cgaagacagtcacttcgtcctgattacatcaagatgtttgtattggatgaggctgatgaa
atgctttcccggggtttcaaggatcagatttatgatattttccagcttctaccatcaaag
attcaggttggggtattctctgccacaatgccacctgaggcccttgagattactaggaag
ttcatgaacaaacctgttagaattcttgtgaagcgtgatgagctcaccctggagggtata
aaacagttttatgttaatgttgataaggaggagtggaaacttgagacactctgtgatctt
tatgaaaccttggccatcacccagagtgtcatttttgtgaacacgaggcgcaaggttgat
tggcttacagacaagatgcggagccgtgaccacacagtctcagccacccatggtgatatg
gaccagaatacaagagacattatcatgcgggaattccgttctggatcatctcgtgtcctt
ataacgactgatcttttggcacgtggtattgatgtccagcaagtctcccttgttattaat
tatgatctccctacacagccagagaactatctgcatcgtattggacgtagtggacggttt
ggtaggaagggtgttgccatcaactttgtaacaaaggatgatgagaggatgctgtttgac
atccagaagttctataatgttgtagttgaggagctgccatcaaatgttgctgatctcctc
taa
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