Quercus lobata (valley oak): 115968115
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Entry
115968115 CDS
T07350
Name
(RefSeq) uncharacterized protein LOC115968115 isoform X1
KO
K17925
sorting nexin-13
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
qlo04990
]
115968115
Domain-containing proteins not elsewhere classified [BR:
qlo04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
115968115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
AAA_28
Motif
Other DBs
NCBI-GeneID:
115968115
NCBI-ProteinID:
XP_030943230
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All DBs
Position
11:39071717..39082656
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AA seq
1064 aa
AA seq
DB search
MKAMRTVQDLIEEAKLRTVWWALCIFAVSYFMTHTSKSMWMNIPISILFVSALRILLNEV
EFRWKVRSVRPPTYLSHLEKKQLSVNDSRLSTMPPPAKWKRKIDSPVVEAAMSDFIDKIL
KDFVVDLWYSEITPDREFPEQIRAIIMDALGEISGRVKELNLVDLLTRDIVDLIGNHLDL
FRRNQAAIGVEVMATLSSEERDERLKHHLMASKELHPALISPESEYKVLQRLIGGVLAVV
LRPREAQSPLIRSIARELVTCLVVQPVMNFASPGYINELIEYILLALNDESLKGVGNYES
TNVVAHPLDHPLAAGAVRDDVTASRKYSSFSQGTDMTLDKINNQREITLDYNTEVPMNQS
ADWARVLNAVTQRRTEVLTPENLENLWTKGRNYKKKELKKIKAGLQDPITKGSGTKNAIP
NKDLGKETLTNMPEIYVGIDQRAVKQLTHGLGIDVLSSDGNKTGKQFFLDPSKKLSFEGG
HPVNELEHTNTPAADGNKSCLKRSNSTSALVVQPHTEKTFTGEHGGSIISEFYSANVGRH
NEEHYGRSASDVVFHSEGQQFPKLRCRVMGAYFEKLGSKSFAVYSIAVTDAENRTWFVKR
RYRNFERLHRHLKDIPNYTLHLPPKRIFSSSTEDAFVHQRCIQLDKYLQDLLSIANVAEQ
HEVWDFLSASSKNYSFGKSSSVMRSLAVNVDDAVDDIVRQFKGVSDGLIRKVSGPLPTYE
ASSSTASRNLPLNADDINRHVSSHYSVGTENSYSDNEEGDKDENHGHEEVNSSTNGWHSD
NELNSKSFPPRVIKCGEEPRNLGSEKRHGLMVKSGIDQGGFPAADLPVISDHWEDPVGMP
PEWTPSNVSVPLLNLVDKIFQLKRRGWLRRQVFWISKQILQLIMEDAIDDWLLRQIHWLR
RDDVIAQGIRWVQDVLWPDGTFFMKLGTAQSNDDDTEPKQKPSQTTTRFGGSKISTLGAF
EQQLEAARRASEVKKMLFACDQGVVHPQIWCFFYIDGAPTALVSLIGHKQYRRCARDIYY
FTQSTTCVKQLGYAILEKSLVSVFPELKNLVHDVHGKMTIPQPV
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgatgaggaccgtacaggatttgatcgaggaggctaagcttcgaacggtttgg
tgggctttgtgtatcttcgccgtttcatacttcatgacccatacgagtaaatcaatgtgg
atgaatatacccatatctattctgtttgtttctgcacttcgcattcttttaaatgaagta
gagttccgttggaaggttcgatcagtccgtccaccaacatatttgtctcatttggagaag
aaacagttgtcagtaaatgattcacgcctttctactatgcctccccctgcaaaatggaaa
aggaaaattgattctcctgttgttgaggctgcaatgagtgattttattgataaaattttg
aaggattttgttgtagatctgtggtattcagaaattaccccagacagggagtttcctgag
cagatacgtgctataatcatggatgctcttggtgaaatctcgggaagggttaaagagtta
aaccttgttgacttgctcacaagggacatagttgatttaatagggaatcacttggacctc
ttcagaagaaaccaagctgctataggtgttgaagttatggcaacgctttcttctgaggag
agagatgaaagattgaaacaccatcttatggcttctaaggagcttcatcctgcgttgata
tctcctgagagtgagtacaaggttcttcaacggctaataggtggagtgttagctgtggta
ctcagaccacgagaagctcaatctcctttgattagatccattgctcgagaacttgtaact
tgcttggttgtgcaaccagttatgaattttgcaagccctgggtacatcaacgagttgatt
gaatacattttgcttgcccttaacgatgagagccttaaaggggtaggtaattatgagtcg
actaatgtggtggctcatccccttgatcatcctcttgctgcaggggctgtacgtgatgat
gttactgcctcaaggaaatattcatccttttctcaagggactgatatgacattggataaa
attaacaatcagagagaaataaccctggattataacacagaagtgcctatgaaccagtct
gctgattgggcacgagtgctgaatgctgtgacccagaggagaactgaagttcttactcct
gaaaatctcgagaacttgtggacaaaaggaagaaattataaaaagaaagaactgaagaaa
atcaaagcagggcttcaagatcctataacaaagggttctggaacaaaaaatgctatacct
aataaagatctgggaaaggaaactttaaccaacatgcctgaaatatatgtaggaatagat
cagagagctgtaaagcagctaacacatggactaggtattgatgttctatcaagtgatggg
aacaaaactgggaaacagttctttctggatcctagcaaaaaattgtcttttgagggaggg
catcctgttaatgaattggagcatactaatactcctgcagctgatggaaataaaagttgt
cttaagagatccaatagcacttctgctttggtagtccaacctcatacagaaaagacattt
acaggagaacatggagggtccattatttcggagttctacagcgccaatgttggcaggcat
aatgaagagcattatggcaggagtgcttcagacgtggtgtttcacagtgagggacaacaa
tttcccaagcttaggtgccgggttatgggagcatactttgagaaacttggatcaaaatct
tttgctgtttattcaattgcagtgacagatgcagaaaataggacttggttcgtgaaaaga
agatacaggaattttgagcgattacatcggcatcttaaagatattcctaattatactcta
catttgcctcccaaaaggatattctcatcaagcacagaggatgcttttgttcatcagcgc
tgcattcagcttgataaatatctgcaagatctcttgtcaatagctaatgttgctgaacaa
catgaagtgtgggattttttgagtgcttcctctaagaattactctttcgggaaatcttcc
tcagtgatgagaagcctggcagtcaatgttgatgatgcggtggatgatattgtgcgtcag
ttcaaaggggtttcagatggcttaattcgtaaagtttctggtccattacccacttatgaa
gcatcttcttcaacagcgagccgaaacttacccttgaatgcagatgatataaatagacat
gtttcaagtcattatagtgtgggaactgaaaacagttattctgataatgaagaaggtgac
aaggatgaaaatcatggccatgaggaagtcaatagtagcaccaatgggtggcattcagac
aatgaattgaactccaaaagctttccccctcgagtaatcaaatgtggtgaagagcctagg
aacttgggttcggagaagagacatggtttaatggtgaaatctgggatagaccagggtgga
tttccagcagcagatctcccggtaatctcagatcactgggaggacccggttggaatgcca
cccgagtggactccgtctaatgttagtgttcctctgttgaatctagttgataagatattt
cagctcaagagaagaggctggctaagaagacaggtcttttggatatcaaaacaaatattg
cagttaataatggaagatgcaattgatgactggctcttgaggcagattcattggctccgg
agagatgacgttatcgctcaagggattcggtgggttcaagatgttctctggcctgatggc
acattcttcatgaaattagggactgctcagagtaatgatgatgatactgaacctaaacaa
aaaccttctcaaactacaactcgatttggtggcagtaagatctctacgttgggggctttt
gaacaacagcttgaggctgctcgcagggcaagtgaggtcaagaaaatgctatttgcatgt
gatcaaggggtcgtacatccacaaatctggtgctttttttatatagatggagctccaacg
gccttggtcagcttgattgggcataagcagtacaggcgttgtgcaagagacatttattat
ttcactcagtctactacttgtgtgaagcaacttggatacgcgatactagaaaaatcactt
gtatcagttttccccgagctgaagaatcttgttcatgatgttcatgggaagatgactatt
ccacaacctgtatag
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