Quercus lobata (valley oak): 115968317
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Entry
115968317 CDS
T07350
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
115968317
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
qlo04040
]
115968317
Ion channels [BR:
qlo04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
115968317
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Motif
Pfam:
Ion_trans
cNMP_binding
ADAMTSL1
Motif
Other DBs
NCBI-GeneID:
115968317
NCBI-ProteinID:
XP_030943535
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Position
11:complement(5929212..5938609)
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AA seq
640 aa
AA seq
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MVMSYQILKKTVSVMSYFCHQQGNGARNNQDIERQFLKNGGGDSVKETTAQKKILDPRKA
FLKRWNVGFVLSCVIAVSLDPLFFYLPVINEEKKCIRLDKKLWITAIVLRSFFDIIYLLH
IILQFRTGFIDKKLLKSGKSELNKDAWKIARKYLWPWFLFDIITILPIPQVVTPTIFSEM
RGTKSSKKVKFLNSIVLFQYVPRVTQIYLSWKKLITNNKKFDRIVLVKASLNFILYILAG
HVLGAFWYFFSTQRLAACWHEACGQNRSRCVGISFDCDHSIGNLSFINDICSLNTENKTS
FDFGIFLKALQSGVLESEDFPQKLFYSFWWGMRNLSSLGQNLETSNYIWENCFALGISIF
GLVLFLYFMGNLQMYMQWTATKSVKNWDKVRKKMKSRKRQKQQKIMRSWISQRGFDSTIK
SEIMRNIDQRFEEDEDVYVENLIPDLPPDLQNNVKRHLCLNLLKNLKFVKDNGLAAKHEQ
LLLKICDSLKPKFYKEHCYIVQEGDPIDAVFLITEGTVWTCTSSSNGGKDSQHAERLEKN
FFGEELLEWVMKSYSADMYNLSKLPIYSKTLKTHTKVEAFVLMASDLKQIWHSKLSQFGP
EELQSQAASRVQRIWRGHRDHPKTDGAVVESKEPSILQRI
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggttatgagttatcaaattctcaaaaaaactgttagtgttatgagttatttttgccat
cagcaagggaacggtgcaaggaataatcaagacattgagaggcaatttcttaagaatggt
ggaggtgattcagtgaaagaaacaacggcacagaagaaaattcttgatccaaggaaggca
ttccttaaaaggtggaatgtaggatttgtattgtcgtgcgtgattgcagtatctttggat
cctctgttcttttatcttcctgtgatcaatgaagaaaagaagtgcattcggttagacaag
aagttgtggatcaccgctatcgttttgcgatccttcttcgatatcatttacctactgcat
atcatattgcaatttcgcactggttttatagacaagaagcttctgaaaagtggaaaatct
gagttgaataaagatgcttggaaaatagctcgtaaatatttatggccgtggttcttattc
gacattataactattcttcccatcccgcaggtggtgactccgactattttttcagaaatg
agaggcacgaaatcttcaaaaaaagtaaaattcttgaactctattgttctcttccaatat
gtgccaagagttactcaaatctacctatcttggaagaaactaataacaaataacaagaaa
tttgatagaatcgtgctggtcaaagcttcattgaatttcattctatacatccttgctggt
catgtattgggagccttctggtattttttctctactcaacgactggcggcttgttggcat
gaagcgtgtggtcaaaatcgtagtagatgtgttggaatttcttttgattgtgaccacagt
attgggaatctgtcttttataaatgatatttgctctttaaatactgaaaacaaaacgtcc
tttgactttggaatatttcttaaagcccttcaatctggtgtcttagaatctgaagatttt
ccacaaaaattattttacagtttctggtggggcatgcgaaatctgagttctcttggtcaa
aaccttgaaacaagtaactacatatgggaaaactgctttgcacttggtatttccatcttt
ggattggtactatttttatatttcatgggaaatttgcagatgtacatgcagtggacggca
acaaaatctgttaaaaattgggataaggtacgcaagaagatgaagtcgcgtaaacgacaa
aaacaacaaaaaatcatgagatcgtggatttcccaacggggctttgatagtaccattaaa
agtgagattatgaggaacatagatcagagatttgaagaagacgaagatgtttatgtggag
aacctgatacctgatcttcctccagaccttcaaaacaatgtcaagcgtcatctctgctta
aatcttctaaagaatctgaaattcgtaaaagacaatgggttggcggctaagcatgaacaa
ctgttgcttaagatctgcgactctctcaaaccaaagttctacaaagagcactgctacatt
gttcaggagggagacccaattgatgcggtttttttaattacggaaggcactgtatggact
tgcacaagcagtagtaatggtggtaaagactcccaacatgctgagcggcttgaaaaaaat
ttctttggagaagaacttcttgaatgggttatgaaatcttactccgcagacatgtacaac
ctatccaaactccccatttattcaaaaaccctcaaaacccacacaaaagtggaagccttt
gttctaatggcctccgacttgaagcaaatatggcattctaagttgtcacaatttggccct
gaagaactgcaatcccaggcagcttcccgtgtacaacgaatttggcgtgggcaccgcgat
cacccaaagacggatggtgctgttgttgaatcgaaggaaccttctattttacaacgaatc
tga
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