KEGG   Quercus lobata (valley oak): 115968347
Entry
115968347         CDS       T07350                                 
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
qlo  Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:qlo03016]
    115968347
Enzymes [BR:qlo01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     115968347
Transfer RNA biogenesis [BR:qlo03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    115968347
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH zf-CCCH_4 zf_CCCH_4 zf-CCCH_2
Other DBs
NCBI-GeneID: 115968347
NCBI-ProteinID: XP_030943585
UniProt: A0A7N2N219
LinkDB
Position
11:46608284..46614012
AA seq 708 aa
MDESTTGIITTTEESVVEKPELSLVPPPASEPVDSHSQSHSELTTEELVAKSIAPIKKHF
LRPPPLRASSNDAVSQTTANAAPAPSQSSFVKDKKSKRQLKRERRQDQKSSKNICPLIAK
TGDITSCPYNDKCRFSHDVEGFKAQKPEDIEGECPFLDSEEPCPYGLACRFLGTHKSKDK
DGVLGGKKKMSDECNGLNKDVQKLLWKNKMKFPKADAKLKALGLLGKAKSKTKIVEEKEE
DETVPGTCHVTDGNGVSEVNGDLDTKLESAEVPEEDDLDIKVGSDEPPMKKPKSVIEENG
NSAKANNGDVTFMEKVVGESCIQTEPEAGMDVTTPEGDRSLKLHPREKKIIDFREKLYLA
PLTTVGNLPFRRVCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGAY
PDTVARAMELIDQECTVDFIDINMGCPIDIVVEKGAGSALLNKPMRIKSIIEAASGTVDK
PITVKVRTGFFEGKNRIDSLITDIGNWGASAVTIHGRSRQQRYSKLANWDYVYQCARKAP
DALQVMGNGDVFSYLDWNTRKADCPELATCMIARGALIKPWIFTEIKEQRHWDITSGERL
NILKDFVRLGLEHWGSDTKGVETTRRFLLEWLSYTCRYIPVGLLDVIPQRLNWRPPSYYG
RDDLETLMVSDSAADWVRISEMLLGKVPDGFTFAPKHKSNAYDRAENG
NT seq 2127 nt   +upstreamnt  +downstreamnt
atggacgagtccactaccggcatcatcaccaccacagaagaatccgtagtggagaaaccc
gagctctctctggtcccgccaccggcgtcagaaccagtcgactctcactctcagtctcac
tctgagctcacaaccgaagaactcgtcgccaagtccattgctccaataaagaaacacttc
cttcgtcctccgcctctcagagcttcctcaaacgacgccgtttcccaaaccaccgccaac
gccgccccagctccgtctcaatcctccttcgtcaaagacaaaaaatccaaacgccaactc
aaacgtgaacgccgtcaggaccaaaaatcatcgaaaaatatctgtcctttgattgcgaaa
accggagatatcacttcgtgtccttacaatgataagtgccgatttagccacgacgttgaa
ggatttaaagctcagaaaccggaggatatagaaggggagtgcccctttttggattcggag
gagccgtgtccttatggcttggcttgtaggtttttgggcacacataaaagtaaagataaa
gatggtgttttgggtggtaagaagaagatgagtgatgagtgtaatgggttgaataaggat
gttcagaagcttttgtggaaaaataaaatgaaatttcctaaggctgatgccaaactcaaa
gctcttggtctcctggggaaggcaaagtcaaaaacgaaaattgttgaagaaaaggaggag
gatgaaactgttccaggtacttgtcatgtcactgatggaaatggtgttagtgaagtgaac
ggtgacttggatactaaattggaatcagctgaagtgccagaagaggatgatctagatata
aaagttggatctgatgaaccacccatgaagaaaccaaaatctgtaattgaagaaaacgga
aactccgctaaagccaacaatggagatgtgactttcatggagaaagttgttggggaaagc
tgtatacaaactgaaccagaagctggaatggatgttacaactccagaaggtgatagaagc
ctaaagttacacccacgtgaaaagaagattatcgattttagagaaaaactgtatcttgca
cctctgaccactgttggaaatcttccattccgaagggtttgcaaagtcttgggagcagat
gtaacatgcggtgaaatggcaatgtgtactaatcttttgcagggtcaagcttcagaatgg
gcactgctgagaagacattcttctgaggatttgtttggtgttcagatatgtggggcatat
ccagacactgtggcacgtgctatggaacttatagatcaagaatgtacagtggactttatt
gacataaacatggggtgcccaatcgatattgtagtggaaaagggtgctggatctgctctt
cttaataagccaatgcggataaaaagcattatagaagcagcttctggcactgtggataaa
cctatcactgtcaaggtgcgaacaggtttttttgaagggaaaaatcgcattgattcactg
attacagacattggcaactggggagctagtgcagtaacaatacatggtcgatcacgtcag
caacggtatagcaagcttgccaactgggactatgtataccagtgtgccagaaaagctcct
gatgctttgcaagttatgggaaatggagatgttttctcgtatttagactggaacacacgc
aaagctgattgccctgaacttgctacatgcatgattgctcgaggagcactaattaagcct
tggatatttactgaaatcaaggaacagaggcactgggacattacttctggggaacgatta
aatattttgaaggattttgtgcgtttgggccttgaacattggggttctgacacaaaagga
gtggagacaacaaggcgatttttattggaatggcttagttatacttgtaggtatatacct
gttggtcttttagatgtcatccctcaaagactgaactggcgccctccctcctactatggt
cgtgatgaccttgagacattaatggtctcagattctgcagctgactgggttcggatatct
gagatgttacttggcaaggttccagatggcttcacattcgcaccaaagcataaatctaat
gcttatgatcgggcagaaaatggctaa

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