KEGG   Quercus lobata (valley oak): 115968364
Entry
115968364         CDS       T07350                                 
Name
(RefSeq) U3 small nucleolar RNA-associated protein 21 homolog
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    115968364
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:qlo03009]
    115968364
Ribosome biogenesis [BR:qlo03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    115968364
SSDB
Motif
Pfam: Utp21 WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_HPS5 ANAPC4_WD40 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_TEP1_C Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_VPS8 PEP5_VPS11_N Beta-prop_SCAP NBCH_WD40 WD40_RFWD3 Beta-prop_WDR75_2nd WD40_like VPS8_N Beta-prop_LRRK2 B-prop_COPA_B_2nd
Other DBs
NCBI-GeneID: 115968364
NCBI-ProteinID: XP_030943608
UniProt: A0A7N2MUX2
LinkDB
Position
11:complement(8627094..8640016)
AA seq 908 aa
MGIFEPYRAIGYITSGVPFSVQRLGTETFVTVSVGKAFQVYNCAKLTLVLVGPQLGKKIR
ALASYRDYTFAAYGNEIAVVRRAHQVATWSAHNAKVNSLLLFGEHVLSVDVEGNMFIWAF
KGIDQPSAPVGHIMLDDKFSPSCIVHPDTYLNKVLLGSQEGSLQLWNISTKKKIYEFKGW
NSSISSCVSSPALDVIAVGCADGKIHVLNIRYDEELVTFSHSTRGAVTALSFSTDGQPLL
ASGGSSGVISIWNLEKRRLQSVIREAHDCSIISLHFFANEPVLMSSSADNSIKMWIFDTS
DGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVSKR
AKKLRVKEEEIKLKPVIAFDCAEIRERDWCNVVTCHMDTAQAYVWRLQNFVLGEHILNPC
PENPTPVKACAISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERRSCAHDGEVIGV
ACDSTNTLMISAGYSGDIKVWDFKGRELKSKWEIGCSVVKIVYHRPNGLLATVADDLIIC
LFDVVALRMVRKFEGHTDRITDLCFSEDGKWLLSSSMDGSLRIWDVILARQIDALQVDVS
ITALCLSPNMDVLATTHVDQNGVYLWVNQAMFSGASNVDSYASGKEVVSVKLPSVSSMES
SQVEDSDKAVVNHLESKEASFTTPDQQIPDLVTLSLLPKSQWQSLINLDIIKVRNKPIEP
PKKPEKAPFFLPSVPSLSGEILFNPSKTANEEKDTKVNEVENKRRESDMPPSQFLQHLQS
SMEMKNFSAFTDYIKGLSPSTLDMELRMLQIIDDDDDQQEPDERPELFSIELLLDYFIHE
ISCRNNFEFIQAVIRLFLKIHGETIRRQSRLQDKARKLLDIQSTVWQGVDKLFQSARCMV
TFLSNSQF
NT seq 2727 nt   +upstreamnt  +downstreamnt
atgggaatattcgaaccgtacagagcgattggatacataactagcggcgtccccttctcc
gttcaacgtttaggcaccgaaaccttcgtcaccgtcagcgtcggcaaagcttttcaagtc
tacaactgcgccaagcttactctggttcttgtcggtcctcaattgggcaagaagatccgt
gctcttgcttcgtatcgcgactacacatttgcggcatacgggaatgagattgctgttgtt
aggcgtgctcaccaggtagcaacttggagtgcgcataacgctaaagtcaattcgttgctg
ttgtttggagaacatgtccttagtgttgatgtggaaggtaacatgttcatatgggcattt
aaaggaattgaccagccttctgctcctgttggacacatcatgctagatgataaatttagt
cctagctgtatagtgcatccagacacctacttgaataaggttcttcttgggagccaggaa
ggttctttgcagctttggaacattagcacaaagaaaaaaatttatgagttcaagggatgg
aactcgtctatatctagttgtgtttcatcaccagcacttgatgtcattgcagtcggctgt
gctgatggaaagattcatgttctcaacattcgctatgatgaagagttggttaccttctcg
cattctacacggggtgctgttacagccttatcttttagcacagatggacagcctcttcta
gcatctggaggctcatctggtgtcattagcatatggaatcttgagaagagaaggctccaa
tcagtcatacgagaggctcatgattgttcgataatttcactgcatttttttgctaatgag
cctgtcttaatgagttcatctgcagacaattctattaaaatgtggatttttgacacaagt
gatggagatccccgtcttctgcgctttcgaagtggacatagtgctcctccactttgcata
agattttatgcaaatgggaggcacattctatcagctgggcaggatcgtgcctttcgcctt
ttctctgtaattcaggatcagcaaagtagggagctttctcaacgtcatgtatctaagcga
gccaagaaactgagggtgaaggaagaagagataaaattgaagcctgttattgcattcgat
tgtgctgaaatcagagagcgggattggtgcaatgtggtaacatgtcatatggatactgct
caggcttatgtgtggagacttcaaaactttgttctcggtgaacatattctaaatccatgt
ccagaaaatccaacacctgttaaggcctgtgcaatcagtgcatgtggcaattttgctgtg
ttagggacagcaggtggttggattgagcgattcaaccttcaatcaggaatcagccgtggc
agctacctggacatgtcagaaagaagaagctgtgcccatgatggggaagtgattggagtt
gcttgtgattcaacaaataccctcatgataagtgcaggatatagtggagatataaaggta
tgggatttcaagggacgcgaactaaaatccaaatgggaaattggttgttctgttgttaag
attgtttaccatcgccctaatggtctattggctactgtggcagatgatttaattatctgc
ttgtttgatgttgtggcgttaagaatggttcgtaaatttgaaggtcatacggatcgcatt
acagatttgtgtttcagtgaggatgggaaatggctcttgtcatccagtatggatggaagt
cttcgaatctgggatgttatcttagcaagacagatagatgcactacaggttgatgtgtct
atcacagcgttgtgtctgtcacccaatatggatgttttagcaactacccatgttgatcaa
aatggggtatacctatgggtaaatcaggcaatgttttctggagcttcaaatgttgattct
tatgcaagtggaaaagaagttgtgagcgttaagctgccatctgtctcttcgatggaaagt
tctcaagttgaggattctgataaggccgttgtgaaccacttagagtccaaggaagcttct
tttactactccagatcagcaaatcccggatctagttactctttcattactgccaaagagt
cagtggcagagtttgatcaatctagatatcataaaggttcgtaataaaccaatagagcct
ccaaagaaacccgaaaaggctcctttcttcttgccttctgttccatctctctcaggagaa
atattgtttaaccctagtaagacagcgaatgaggagaaggatactaaggttaatgaggtg
gaaaacaagaggagggaatctgatatgccaccatcccaatttttgcaacatcttcagtcc
tctatggagatgaaaaatttttcagcatttaccgattatattaaaggtttatctccatca
actttggacatggaacttcgaatgcttcaaattatagacgatgatgatgatcagcaagaa
ccagatgaaagaccagagttgttttcaatagaactacttttggattactttatacatgag
atttcctgcagaaacaattttgagttcattcaagctgtcatcaggttgtttctgaagatt
catggtgaaacaattaggcgtcagtcaagattacaggataaggcaaggaagcttcttgat
attcaaagcacagtatggcaaggagtagataaattgttccaaagtgctagatgtatggtc
acttttcttagcaattcacaattttag

DBGET integrated database retrieval system