Quercus lobata (valley oak): 115968568
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Entry
115968568 CDS
T07350
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
115968568
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
qlo04040
]
115968568
Ion channels [BR:
qlo04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
115968568
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Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
115968568
NCBI-ProteinID:
XP_030943845
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Position
11:complement(6156747..6178525)
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AA seq
626 aa
AA seq
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MSYLGYLQGNSARKGDIEGQRQVLKNGGGDSVKEKKTLKAYILDILDPREKFLKRWRVGF
VLSCMTAVAVDPLFFYLPVINQKKKCIGFDGRLWKTTLVLRTFFDIIHLLHIILQFRTGF
IDEELRKLAKPELNTDAWKIAQKYLWPRFLLDILTILPIPQVVVRIIISEMRGTESTHIV
KFLNVVVLFQYVPRVYQIYLSWRKLITNDKKFDRILRVKAPLNFILYILAGHVLGAFWYF
SSTQQLAACWHVACDRNRTRCCGTSFNCDRSSRDLSFINDICRINVPNTTSTFDFGIFFP
ALQSGVLESPDFPQKLFFSFWWGMRNLSSLGQNLQTSNHIWENCFALSISIFGLILFLYF
LGNLQMYMQWTRSKSIKKWDKIRMKMKSSQRQKQHKGMISWISQKNFDRTEKSLIMENIN
QRYEEGEDVNVENLVPNLPTDLQTKVKRHICLQILKNLKIMKDNGLDERTQLLHKICDSL
QPKFYNEHCYIVKEGDPIDALFLITNGIVWTYTSNNGEGSDSRRAERLEKGQHFGGKLLE
WVLKPTSDDMRNLSILPVSSKTLKTHTKVEAFALMAHDFKKIMESKFSLLGPEELQSKAA
IRVQRSWHQHRAKTDDDVVLDRAASL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcttggctatctgcaagggaatagtgcaaggaagggcgacattgaggggcag
aggcaagttcttaagaatggtggaggtgattcagtgaaagaaaaaaagactttgaaggca
tatattcttgatattcttgacccgagggagaaattccttaaaagatggagggtaggattt
gtattgtcatgtatgactgcagtagcagtggatccattgttcttttaccttcctgtgatc
aatcaaaagaagaagtgcattgggtttgacggtagattgtggaaaacaactctcgttttg
cgaactttcttcgatatcattcacctactgcatattatattgcaatttcgcactggtttt
attgatgaggaacttcggaaactggcaaaacctgagttaaatacagatgcttggaaaata
gctcagaaatatttgtggcctcggttcttactcgacattctaactattcttcccatccca
caggtggtagttcgaattattatttcagaaatgagaggcacagaatctacacatatagtg
aaattcttgaacgttgttgttctcttccaatatgtgccaagagtttatcaaatctaccta
tcctggaggaaactaataacaaatgacaagaaatttgatagaatcttacgggtcaaagct
ccattgaatttcattctatacatccttgctggacatgtattgggagcgttttggtatttt
tcctctactcaacaactagcagcttgctggcacgtagcgtgtgatcgaaatcgtactaga
tgttgtggaacttcttttaactgtgatcgtagttctagagatctctcttttataaatgat
atttgccgaataaatgtcccaaatacaacgtcgacctttgactttggaatattttttcca
gcccttcagtctggtgtcttagaatcgccagattttccacaaaaattatttttcagtttc
tggtggggcatgcgaaatctgagttctcttggtcaaaacctccaaacaagtaaccatata
tgggaaaactgctttgcactttctatttccatctttggcttgattctatttctatatttc
ttgggaaatttgcagatgtacatgcagtggacaagatcaaaatccataaaaaaatgggat
aagatacgcatgaagatgaagtcaagtcaacgacaaaaacaacataagggcatgatatca
tggatttcccaaaagaattttgatcgtacagaaaaaagccttattatggaaaacataaat
cagagatatgaagaaggcgaagacgttaatgtggagaacctggtccccaatcttccaacg
gatcttcaaacgaaagttaagcgtcatatctgcttacagatactaaagaatctaaaaatc
atgaaagataatggcttggatgagcgtacacaactgttgcataagatttgcgactctctc
cagccaaagttctacaatgagcattgctacattgtcaaggagggagaccctattgatgca
ttattcttgattacaaatggcattgtatggacttatacaagcaataatggtgaaggatct
gactctcgacgtgctgagcgtcttgaaaaaggtcagcactttggaggaaaacttcttgaa
tgggttttgaaacctacctccgacgacatgcgcaacctatccatacttcctgtttcttca
aaaaccctcaaaacccacacaaaagtggaagccttcgctctaatggcccacgacttcaaa
aaaataatggagtctaagttctcactattaggacccgaggaattgcaatccaaggctgca
attcgtgtacaacgaagttggcaccagcatcgtgcaaagacggatgatgatgttgttcta
gacagggcagcttctctttga
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