Quercus lobata (valley oak): 115968597
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Entry
115968597 CDS
T07350
Name
(RefSeq) ATP-dependent DNA helicase Q-like 3 isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03440
Homologous recombination
qlo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115968597
03460 Fanconi anemia pathway
115968597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
qlo03032
]
115968597
03400 DNA repair and recombination proteins [BR:
qlo03400
]
115968597
Enzymes [BR:
qlo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
115968597
DNA replication proteins [BR:
qlo03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
115968597
DNA repair and recombination proteins [BR:
qlo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
115968597
Bloom's syndrome complex (BTR)
115968597
FA (Fanconi anemia) pathway
115968597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Imm64
Motif
Other DBs
NCBI-GeneID:
115968597
NCBI-ProteinID:
XP_030943881
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All DBs
Position
11:complement(1083995..1095127)
Genome browser
AA seq
757 aa
AA seq
DB search
MKKSPLPVQTIRGSDKQVCGKEGLVKLLRWHFGYADFRGTQLDAIQAVLSGRDCFCLMPT
GAGKSMCYQIPALAKPGIVLVVSPLIALMENQVMALKEKGIAAEYLSSTQTSDVKNKIHE
DLDSGKPSVRLLYVTPELISTLGFMSKLTKIYTRGLLNLIAIDEAHCISSWGHDFRPSYR
KLSSLRSRLPNVPILALTATAVPKVQQDVMESLCLQNPLVLKSSFNRPNIYYEVRYKDLL
VDAYADLSDLLKSYGDVCGIVYCLERTTCDDLSAHLSKSGISCAAYHAGLNNKVRTSVLD
NWISSKIQVVVATVAFGMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYY
GMDDRKRMEFILSNAKNKLPSLGSQEDLPKKSLTDFTQVMSELYLYIINVLWWLNTKIYR
WLSIVKVLDAEGKKFLRVLASRYSNVPASLCRKSCDACKHPNLVAKYLEELTTTCAVRQK
SSFSRIFISSSSDMIDGEQSSEFWNRDDDTSGSDEDISDSDAPKLPDATEVVKSLAKSKL
PSKSGLNEKIELLQRAEERYYQNNFSNRKVDKLDKNVISETLRESSKQRLLNALKQAQQR
LGNFKLEVEVSACFLENECYKKYGRTGKSFYYSQVASTVRWLSTTNSSELTNRLGITANA
QSEDVASKAEPPTTPLLSLDQGPTESTSKDLNGRARTESSACTSPIQSASSSAKLPEIPS
FSNFVSSRKAIDNRSNTSQKHSPKRVQKNLEKRMRLQ
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtcaccgttaccggtgcagaccatacgtggctccgataagcaggtatgcgga
aaggaaggattggtgaagcttctgaggtggcattttggttatgctgatttcagaggcacg
caattggatgctatccaagctgttctctctgggagagactgtttttgtttgatgccaact
ggagctgggaagtcaatgtgttatcagattcctgcattagctaaacctggaattgttctt
gttgtttctcctttaatagccttgatggagaaccaagtgatggcattgaaggagaaagga
attgcagctgaatatctttcttcaacccaaacatcggatgttaaaaacaagatccatgag
gaccttgattctggcaaaccatcagttaggctgctatatgtaacaccagaattgatttca
acactgggatttatgtcaaagctgactaagatttacactagagggttgttgaatctcatt
gccatagatgaggcacattgcatctcaagttggggccacgatttcaggcctagctaccgt
aagctttcatctttgaggagccgccttccaaatgtaccaatattggctttgacagctacg
gctgttcctaaagttcagcaggatgtgatggagtccttatgcctgcaaaaccctttagtc
ctaaaatcttcattcaatcgtcctaatatatattatgaagttcgttacaaagaccttcta
gttgatgcctatgctgatttgtctgatcttctcaaatcttatggagatgtttgtggaata
gtatactgccttgaacggacaacctgtgacgacttatctgctcatctatcaaaaagtggc
atttcctgtgctgcgtatcatgcaggactgaataataaggtgcggacgtctgttttagat
aattggatttcttctaagatacaagttgttgtggccacggtagcttttgggatgggtata
gatagaaaggatgtcagaattgtttgccacttcaatattcctaagtcaatggaagccttc
tatcaagagtcaggtagagctggccgtgatcaattaccctcaagaagtctgttgtactat
ggaatggatgatcgcaaaagaatggaatttattcttagcaatgccaagaacaagctacca
tccttgggttcacaggaagatttgccaaaaaagtccctgactgactttactcaggtgatg
tctgaactgtatctctatatcattaatgttttatggtggctgaatacaaaaatatacaga
tggttgagtattgtgaaggttctagatgccgaaggaaaaaaattcttgagagttttggcg
agcaggtattctaatgtacccgcatcgctatgtagaaaatcatgtgatgcctgcaaacat
ccaaacctagtagctaagtatctggaggagctcacaactacttgtgctgttaggcagaag
agtagtttttctcgaatttttataagcagctcctcagatatgattgatggagaacaatct
tctgaattctggaatcgtgatgatgacacaagtggatctgatgaagatatatctgattct
gatgcccctaaactaccagatgctactgaggttgtcaagagcctcgccaagtcgaagtta
ccatcaaagtcagggctaaatgaaaagattgagttattgcagcgtgcagaagaaagatat
taccagaataatttctctaatagaaaggttgataaacttgataagaatgttatatccgag
actctgagggaatcaagcaagcaaagattactaaatgcgctaaagcaggctcaacagcgg
cttggcaactttaagcttgaggtggaagtatctgcttgtttccttgaaaatgagtgctac
aagaaatatgggaggactgggaaatcattttattattcacaagtggcgagtactgtgagg
tggctatcaaccacaaattcttcagaattaacaaatcggcttggcatcactgccaatgcc
cagtcggaggacgttgcttctaaagcagagcctcctacaacaccattgctttcattggat
cagggaccaacggaaagcacaagcaaagatctcaatggcagagctagaacagaaagttct
gcatgtacttccccaatacaaagtgcttcttccagtgcaaagcttcctgaaattccatcc
ttctcaaattttgttagcagcagaaaggcaatagacaaccggtctaatacttcacaaaag
cactcacctaaaagagttcagaagaacctagagaagaggatgaggctgcaatag
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