Quercus lobata (valley oak): 115968679 Help Entry 115968679         CDS       T07350                                  Name (RefSeq) DNA damage-binding protein 1a   KO K10610   DNA damage-binding protein 1 Organism qlo  Quercus lobata (valley oak) Pathway qlo03420   Nucleotide excision repair qlo04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:qlo00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     115968679   09124 Replication and repair    03420 Nucleotide excision repair     115968679  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:qlo04121]     115968679    03400 DNA repair and recombination proteins [BR:qlo03400]     115968679 Ubiquitin system [BR:qlo04121]  Ubiquitin ligases (E3)   Multi subunit type E3    Cul4 complex     Adoptor protein      115968679 DNA repair and recombination proteins [BR:qlo03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      Cul4-DDB2 complex       115968679     TCR (transcription coupled repair) factors      Cul4-CSA complex       115968679 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_RSE1_2nd Beta-prop_RSE1_1st CPSF_A Motif Other DBs NCBI-GeneID:  115968679 NCBI-ProteinID:  XP_030944014 UniProt:  A0A7N2MVF0 LinkDB All DBs Position 11:1496773..1520893 Genome browser AA seq 1089 aa AA seqDB search MSIWNYVVTAHKPTNVNHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAETSELITRAMGDVSDRIGRPTDNGQI GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVL YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGANLLIPVPPPLCGVIIIGEETIVYC SANAFKAIPIRPSITRAYGRVDADGSRYLLGDHTGLLHLLVITHEKEKVTGLKIELLGET SIASTISYLDNAFVYIGSSNGDSQLVKLNLHPDAKGSYVEVLERYVNLGPIVDFCVVDLE RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS FISETRILAMNIEDELEETEIEGFCSQVQTLFCHDAVFNQLVQVTSSSVRLVSSTSRELR NEWNARPGYSINVATANATQVLLATGGGHLVYLEIGDGVLTEVKHAQLEYEISCLDINPI GENPNYSQLAAVGMWTDISVRIFSLPDLNLITKEPLGGEIIPRSVLLCVFEGISYLLCAL GDGHLLNFLLNTSTGELADRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICH QEQSRTFAICSLKSNQSSTEDSETHYIRLLDDQTFEFISTYQLDTFEYACSILSCSFSDD SNVYYCAGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGSVYSLNAFNGKLLAGI NQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG AIEERARDYNANWMAAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVAGEYHL GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQSNLRKV IKGVGGLSHEQWRSFNNEKKVVDARNFLDGDLIESFLDLNRSKMDEVSKAMNVTVEELCK RVEELTRLH NT seq 3270 nt NT seq  +upstreamnt  +downstreamnt atgagtatctggaactatgtggttacggctcacaagcccaccaacgtgaaccactcttgc gtcggcaatttcaccagccctcaagagctcaacctaatcatagcgaaatgcacccgaatc gaaattcatttacttactcctcagggcttgcagcctatgctggacgtgccaatatatggg agaattgcaacacttgaactttttcgccctcatggtgaggcacaagattttctatttatt gcaacagaaagatacaaattctgcgtgcttcaatgggatgctgagacatctgagcttatc acaagagcaatgggggatgtttcggatcgtattggtcgtcctacagacaatggtcagatt ggcataattgatccagattgcagactaattggactccatttatatgatggattgttcaag gtcattccttttgataataaagggcagcttaaagaagcatttaacattaggcttgaggaa cttcaagttttggatatcaagtttctgtatggttgttcaaaacctacaattgtggttctt taccaggataacaaagatgctcgccatgttaaaacgtatgaggttgctcttaaggataaa gattttgttgagggtccctggtcccagaacaatcttgacaatggagctaatttgctaata ccggtacctccaccactttgtggcgtcattattattggagaagaaacaattgtctactgc agtgccaatgcatttaaagcaattccaatcagaccgtccatcacaagagcctatggaaga gttgatgctgatggttctaggtatttacttggtgatcatactggactacttcacctactt gttataacccatgagaaagaaaaggttactggactcaaaatcgagctcttgggcgaaact tccattgcatctaccatttcatatcttgataatgcatttgtatatattggctcaagcaat ggagattcacagcttgtaaagttaaatcttcaccctgatgcaaaaggctcatatgtggaa gtactggaacgatatgtcaatttggggccaattgttgacttttgtgttgtggaccttgag aggcaaggccaaggtcaggttgtaacttgttctggagcttataaagatggttctcttcgc atagttcgaaatggaataggaattaatgaacaggcttcagtggaacttcaaggtattaag ggaatgtggtcactaagatcttccacagatgatccatttgacacattcctggttgtaagt tttatcagtgagacacgaattttggcgatgaatattgaggatgagttggaagaaactgag atagagggcttctgctctcaagtgcagaccctattttgccatgatgctgttttcaaccaa cttgtacaagtaacttcaagctctgtgagactggtcagttctacatctagagagctacgg aatgaatggaatgctcgacctggctattcaattaatgttgccactgctaatgccacccag gttttattggcaactggtggtggccatttggtttatttagaaattggagatggggtcttg acggaagtaaaacatgcacaattggagtatgagatctcatgccttgacataaaccccatt ggggagaatcccaactatagtcagctagctgctgttggtatgtggacagatattagtgtg cggatattttcgcttcctgacctgaatcttatcactaaggagcctttggggggagaaatt atacctcgctctgttcttctttgtgtctttgaagggatatcttacttgttatgtgccctt ggagatggacatttattaaattttctattgaacacaagtactggtgaactagcagatagg aaaaaggtctctcttgggacccagcctattactcttcgcactttctcttccaagaatact acacatgtatttgctgcgtcagataggccaactgttatctacagtagcaacaagaagcta ctttacagcaatgttaatttgaaagaagttagccatatgtgcccttttaactctgcagct tttccagacagccttgcaatcgcaaaagaaggtgaacttactattggcaccattgatgat atccagaaacttcatatccgctctataccgcttggggagcatgcacgccgtatctgtcat caagagcagtccaggacctttgctatttgcagtctgaagtcaaaccagtccagtacagaa gattctgaaacgcactatatccgtctgctggatgaccagacctttgagttcatatccact taccaacttgacacctttgaatatgcttgttccatccttagttgttctttctctgatgat agtaatgtgtactactgtgcgggcactgcatatgtattaccagaagagaatgagccaacc aagggccgaatattagttttcattgttgaagacgggaagctacagcttattgctgagaag gaaaccaaaggatctgtttactctctgaatgctttcaacggcaagctgctggctggtatc aatcaaaaaatccaattgtacaagtggatgctccgggatgatggtactcgtgagttacaa tctgaatgtggacatcacggacacatacttgccctctatgtgcaaactcgtggagatttc attgttgttggtgacctgatgaaatcaatctccttgttaatctacaagcatgaagaaggt gccattgaggagcgagcccgtgactataatgcaaattggatggcagctgttgagattctt gatgatgacatttaccttggtgctgaaaataacttcaatcttttcactgttcggaagaac agtgaaggtgccactgatgaggagcggggccgtcttgaggtagctggcgagtatcacctt ggagaatttgtcaatcgattccgacatggttcccttgttatgcgcttgccagattctgat gtgggccagattccaactgtcatttttggtactgttaatggtgtaattggagtcattgct tcccttcctcatgagcagtatctctttttagagaagcttcagtcgaacctgaggaaggtg ataaagggtgttggagggttgagccacgagcagtggaggtcatttaacaatgagaagaaa gtagttgatgccagaaattttttggatggagatctcatcgagtcattccttgatctcaac cgtagtaagatggacgaggtttcaaaagcaatgaatgttacagttgaggagctttgcaag agagttgaagaattgacgagattgcattga

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