Quercus lobata (valley oak): 115968733
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Entry
115968733 CDS
T07350
Name
(RefSeq) lysine--tRNA ligase, cytoplasmic-like isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
115968733
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
qlo01007
]
115968733
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
qlo03016
]
115968733
Enzymes [BR:
qlo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
115968733
Amino acid related enzymes [BR:
qlo01007
]
Aminoacyl-tRNA synthetase
Class II (A)
115968733
Transfer RNA biogenesis [BR:
qlo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
115968733
Prokaryotic type
Other AARSs
115968733
SSDB
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Paralog
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Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
115968733
NCBI-ProteinID:
XP_030944083
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Position
11:complement(5234129..5270948)
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AA seq
617 aa
AA seq
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MEGSVDEKEKAVLGSVTVSPAAGETVSKNALKKELKNKQREEERRRKEEEKAKQAASMAD
SRSKKSAAADDEDMDPTQYFENRLKYLAALRAAGEEPYPHKFPVTMSNPEYVEQYKNIGN
GEHLEDVTVNLAGRIMSKRSSSSKLFFYDLHGGAAKVQVMADASKSDLNEEEFSRFHSTV
KRGDIVGVKGFPGKTKRGELSIFPRSFIVLSHCLHMMPRQKPKAGSVSDNANLKKEEAWV
PGCTRNPETYILKDQETRYRQRYLDLMLNMEVRQIFKTRSQIISYIRRFLDSRDFLEVET
PMMNMIAGGAAARPFVTHHNDLNMKLFMRIAPELYLKELVVGGLDRVYEIGKQFRNEGID
LTHNPEFTTCEFYMAFADYNDLMELTETMLSGMVKELTGGYKIKYHANGLDEDPIEIDFT
PPFRRIDMIEELEKMANLNIPKDFSSDEANKYLKDVCTKYEIKCAPPETTARLLDKLVGH
FLEETCTNPAFIINHPELMSPLAKWHRTKKGLTERFELFINKHELCNAYTELNDPVVQRQ
RFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGLGIDRLTMLLTDSQNIKEVLLF
PAMKPQDEPSAKGNAGA
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggagggctcagtcgatgaaaaggagaaagcagtcttgggttcggtgacagtctcccct
gctgctggagaaactgtcagcaaaaatgcactaaagaaagaattgaagaataagcaaagg
gaagaagaaaggcggcgcaaggaggaggagaaggcaaaacaggctgcttctatggcagat
tcccgcagcaagaaatctgcagcagctgacgatgaagatatggatccaacgcaatacttc
gaaaatagattgaagtatcttgcagctctgagggcagctggtgaagagccatatcctcac
aaattccctgttacaatgtctaaccctgaatatgtagagcagtataaaaacataggcaat
ggggagcatcttgaggatgttactgtaaatttggctgggcgtatcatgagcaaacgctca
tcttcttcaaagctattcttttatgatttacatggtggtgctgctaaagtccaagttatg
gctgatgctagcaagtcggatttgaatgaggaagaattttctaggttccattcgactgtg
aagcgtggtgatattgttggtgtcaaggggtttccagggaaaactaaaaggggggagcta
agtatttttccaagatcgtttatagtcttatcccattgtctccatatgatgccaaggcaa
aagcctaaggctggttctgtgtctgacaatgccaatttgaagaaagaggaggcttgggtc
ccaggatgtaccaggaatcctgaaacatatattttgaaagaccaggaaactcgttatcgg
caacgctatttagatttgatgttgaatatggaggttcgacaaatttttaagacaagatct
cagatcatttcatatattcggcgctttcttgacagtcgtgatttcttggaggttgaaaca
ccaatgatgaatatgattgctggtggagcagctgcccgtccgtttgtgacccatcacaat
gacctgaacatgaagctattcatgcgcattgcacctgagctctatcttaaggagcttgtt
gttggtggacttgaccgtgtttatgagattggaaagcagttcagaaatgagggcatcgat
ttgacgcataatcctgagttcaccacctgtgagttctatatggcttttgctgactacaat
gacttgatggaactcactgagacaatgttgagtgggatggtaaaggaacttacaggcgga
tataaaattaaatatcatgcaaatgggctggatgaggatccaattgagattgacttcact
ccacctttcagaaggattgacatgatagaagaattagagaagatggcgaacctcaatatt
cccaaggacttttccagtgatgaggccaacaaatatttgaaagacgtatgcacgaagtat
gagatcaaatgtgcccctcctgaaacaacagcacgtttgttggacaaacttgtaggacac
ttcttggaagagacttgtacaaatcctgctttcatcattaaccaccctgagttaatgagt
cctttggcaaagtggcatagaacgaagaaaggccttactgagcgttttgagttatttatt
aacaagcatgaactctgcaatgcatacactgaattgaatgaccctgtggtacaacgccag
cgatttgctgagcagctcaaggatcggcaatctggtgatgatgaagcaatggctttggat
gaaaccttctgtacggctcttgagtatgggttgcctccaacaggtggttggggattgggt
attgatcggctaacaatgttgttaactgattcacaaaacattaaggaggttcttctcttc
ccagccatgaaacctcaagatgagccatctgctaaaggcaatgcaggagcttag
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