KEGG   Quercus lobata (valley oak): 115968771
Entry
115968771         CDS       T07350                                 
Name
(RefSeq) cyclin-dependent kinase D-3-like
  KO
K02202  cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo03022  Basal transcription factors
qlo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    115968771
  09124 Replication and repair
   03420 Nucleotide excision repair
    115968771
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:qlo01001]
    115968771
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:qlo03021]
    115968771
   03019 Messenger RNA biogenesis [BR:qlo03019]
    115968771
   03400 DNA repair and recombination proteins [BR:qlo03400]
    115968771
Enzymes [BR:qlo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     115968771
    2.7.11.23  [RNA-polymerase]-subunit kinase
     115968771
Protein kinases [BR:qlo01001]
 Serine/threonine kinases: CMGC group
  CDK family
   115968771
Transcription machinery [BR:qlo03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     115968771
Messenger RNA biogenesis [BR:qlo03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Capping factors
     115968771
DNA repair and recombination proteins [BR:qlo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     115968771
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr ABC1 Haspin_kinase UBA_HYPK Seadorna_VP7
Other DBs
NCBI-GeneID: 115968771
NCBI-ProteinID: XP_030944129
LinkDB
Position
11:14394368..14405907
AA seq 413 aa
MTELDFSKKVADRYLKREVLGEGTYGVVFKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR
EIKLLKELKDPNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT
LKGLAICHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARIFGSPDRKFTHQVFARWYRAP
ELLFGTKQYGSGVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTPSQWPDMV
YLPDYVEYQYVPSPTLRSLFPMASDDALDLLSKMFTYDPKSRISVQQALEHRYFSSAPPP
TNPDKLPRPAPKRESRASDSHDGPTVLSPPRKSRRVMPERDGFEGNAYQVGKVDDHVGEM
RQAAGENTSRNEPVPMSIDFSIFGAKPPNRPTINSADRTHLKRKLDLEFQHPE
NT seq 1242 nt   +upstreamnt  +downstreamnt
atgacggagctcgatttctcaaagaaagtcgccgataggtatctgaagcgcgaagttctc
ggagaaggtacctatggagtcgtcttcaaagccattgatactaagacaggacagacagtt
gcaattaaaaagattcggcttgggaagcaaaaggaaggggtaaattttacggcgcttaga
gaaattaaacttcttaaagagctcaaagatccaaatataattgagttaatcgatgcgttc
cctcacaagggtaatttgcatcttgtgtttgagttcatggagacagaccttgaagctgtt
atccgtgaccggaatatatttctatctccagctgacataaaatcataccttcaaatgaca
ctcaaaggacttgctatttgccacaagaaatgggttttacatagggatatgaaaccaaac
aacttgttgataggatctaatggacagctcaaacttgcagattttggtttagcacgaata
tttgggagcccagatcgcaagtttacacaccaggtctttgcgcgatggtatagagcacct
gagctgttgtttggtaccaagcaatatggctctggggtggatgtttgggctgcagcatgc
atatttgctgaacttctcctgcgtcgaccttttctgcagggatcaagtgacattgatcaa
ttgggaaaaatctttgctgcatttgggactccaacaccttctcagtggcctgatatggtg
taccttcctgattatgtggagtatcaatacgttccttctcccactttacggtcactcttt
ccaatggctagtgatgatgccctagatctgttatcgaagatgtttacttatgatcctaaa
tctagaatatctgtgcagcaggcattagagcatcggtacttttcatctgcgcctccacct
acaaacccagataaactccctagacctgcacctaagagggaatctagggcctcagattca
catgatggccctactgtcttatcacctccaagaaagtccaggcgagtgatgccagaacgt
gatggttttgagggaaatgcataccaagtaggtaaggttgatgatcatgttggtgaaatg
agacaggcagctggtgaaaatacaagcaggaatgaaccagtaccaatgtcaatagatttt
tctatctttggagcaaaacctccaaatagacctaccattaacagtgctgacaggacacat
ttgaaaaggaaattagatcttgaattccaacaccctgagtaa

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