Quercus lobata (valley oak): 115968861
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Entry
115968861 CDS
T07350
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase isoform X1
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
qlo03009
]
115968861
Enzymes [BR:
qlo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
115968861
Ribosome biogenesis [BR:
qlo03009
]
Eukaryotic type
Other ribosome biogenesis factors
115968861
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_N
NSUN5_fdxn-like
Methyltransf_25
PCMT
Ubie_methyltran
Methyltransf_31
FtsJ
RrnaAD
RsmF-B_ferredox
Methyltransf_4
ASPP2-like_RA
Motif
Other DBs
NCBI-GeneID:
115968861
NCBI-ProteinID:
XP_030944242
UniProt:
A0A7N2KR36
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All DBs
Position
2:complement(386999..392799)
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AA seq
510 aa
AA seq
DB search
MAAVGRGKTRLSNGERSAYFARREAAKVLGSVLQGDARRQAVGSIKSLIYRPCIRNKKAT
FALVCQTLKHLPIIKDVLDAATILNAKWKRQQDLIYIITYDILFGQAVSLVGDAEKFLMH
QKDALQTALARLLVKKKVKTPQDLVDLYRIPEISKPRYVRVNTLKMDVDSALLELGQQNM
VKKDNMVPDLLILPPSTDLHNHPLVTNGSVFMQGKASSMVAAALDPKPGWEVLDACSAPG
NKTVHLAALMRGKGKIIACELNKERVIRLKETIKLSGASNIEVLHGDFLNCNPNDPSFSK
VRAILLDPSCSGSGTASVRLDHLLPSNAAGHASDVTHTERLNKLAAFQRKVLMHALSFPA
VERVVYSTCSIHQIENEDVVKSVLPLAASYGFQLATPFPQWQRRGLPVFEGFQHLLRTDP
VEDGEGFFIALFTKRDDKNHSEKQATCRNNSKSLARDGCTSRFRNGKKRIVINFAHTKLF
LMWLHAKQSRRKRDNFNTGGSYRPMTTDCF
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtagggcgtgggaagacgcggctgagcaacggggagcggtcggcgtacttc
gcaaggagagaggcagcgaaggtattaggaagtgtcctccaaggcgatgctcgtcgccaa
gcagtgggctccataaaatctctgatatataggccttgtatcagaaacaagaaggccacc
ttcgctctcgtctgccaaacactcaagcatcttcctattattaaggatgttttggatgct
gctaccattctcaatgccaaatggaagaggcaacaggacttaatttacattatcacatat
gacattctttttggccaggcagtttcattagttggggatgccgagaaatttctgatgcac
cagaaagatgctttacaaacagctctagcacgcctgttagttaagaaaaaagtgaagacc
cctcaagatttggtggatctttatcgaattcctgaaatttcaaagcctcgttatgttcgt
gtcaatactctgaaaatggatgttgattcagccttacttgaattagggcaacaaaacatg
gttaaaaaggataacatggttcctgacttgttgatactcccaccaagtactgacttgcat
aatcatcctctggtcacgaatggaagtgtctttatgcaagggaaggcaagttctatggtg
gcagcagctcttgatcctaaaccaggatgggaggttcttgatgcatgctcagcccctgga
aacaaaactgtccaccttgccgctctaatgagaggaaaggggaagattatagcatgtgag
ctgaataaggaaagggttatacgtctaaaagagaccattaaactctctggtgcctctaat
atagaagttctgcatggagatttcttaaactgcaatccaaatgatccgtccttttccaag
gttcgtgcgattcttttggatccttcatgctctggttctgggacagcctctgtgagattg
gaccatctgctcccatctaatgctgcaggtcatgcatctgatgttactcatactgaaaga
ttgaacaagcttgcggctttccagagaaaagtgctcatgcatgcattatcttttcctgca
gttgagagagtggtttacagcacatgttccatacaccaaattgaaaatgaagatgtcgta
aaatctgttcttcctcttgctgcatcatatggttttcaactggcaactcccttcccccaa
tggcagcgccgtggcctcccagtttttgaaggctttcaacatcttttgcgaaccgatcct
gttgaggatggagaaggctttttcattgccttatttacaaagagagacgacaaaaatcac
tccgaaaagcaagcaacctgcagaaataattccaaatctcttgccagagacggctgcacc
agtagatttagaaatgggaagaaaagaattgtaataaactttgcccatactaaattgttt
ctgatgtggttgcatgcaaaacagagtaggcgaaaaagagacaacttcaatactggtggc
tcgtatagaccaatgactactgattgcttttga
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