Quercus lobata (valley oak): 115969088
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Entry
115969088 CDS
T07350
Name
(RefSeq) nuclear poly(A) polymerase 1-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115969088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115969088
Enzymes [BR:
qlo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
115969088
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
115969088
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
115969088
NCBI-ProteinID:
XP_030944514
LinkDB
All DBs
Position
11:25864761..25867367
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AA seq
693 aa
AA seq
DB search
MAMPKSNQMWEPISTAQPSELDVSRTQELQKLMENAGLYESREEALKRQEVLGRLDQIVK
SWVKKVTEAKGYNEEMVEEVNAVIITFGSYRLGVNGPGADIDTLCVGPRHATREEDFFGE
LHRMLSELPEVQELHPVPDAHVPVMKFKFNGVSIDLLYANLGLWVIPDDLDLSVPCFLQD
LDEKSVLSVNGSRVTDKILRMVPNVQSFQTTLRCIRYWAKQRGIYSNVAGFLGGINWAIL
VARICQLYPTALPSLLVSRFFKVYSQWRWPNPVLLCPIEGGSLVLQSWDPRRNFRDRNDL
MPIITPAYPCINSSYNVSSSTLCIMQQEFQRGNNICEAMDASVTGWNSLFENFLFFEAYK
NYLQIDITARKEIDLMNWQGWVESRLRLLTSKIERDTRGMLQCHPHPGECLDKSKKFHRC
YFMGLQRKPGVCAQEGEPFDISFTVEEFKNTVGMYTCKKPGMWIGVCHIKRNNIPLFVFP
GGVRPARPKRVARENGAAAEADEAGNGKKRKIDESITGHKLRKYDSMAGTRNSPLAVEAK
VEDCSITARCPIVDCSQSCLGVEGPFRFNPPVGASSSVGCSSSSTAVEILVSDLVPAPSV
CQQGSSKEHDRFQDDAQSTGEVQQNFGEGTRVENDGVQQGVATSKDCSNIFRNDGGVEEL
EPTAPSSNAVSAAYLAPKPVIKFNFTSLVRANC
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggctatgcccaaatcgaatcaaatgtgggaaccgatttcgactgctcagccttctgaa
ttagatgtgagtaggacccaggaattacagaagttaatggagaatgcagggttgtatgag
agtcgtgaggaagctctgaaaaggcaggaggtgctggggaggttggaccaaattgtgaaa
tcatgggtcaaaaaggtgactgaggctaaggggtataatgaggagatggtggaagaagta
aatgctgttatcattacatttgggtcttatcggttgggtgtaaatggcccaggtgctgat
attgacacgctgtgtgttgggccgaggcacgctacacgggaggaagacttctttggtgaa
cttcataggatgctgtctgagttgcctgaagtgcaagagttgcatcctgtccctgatgct
catgttcctgtcatgaaatttaagttcaatggggtttccattgatcttctttatgcaaat
ttggggttgtgggttattccggatgatttggatctttctgtaccatgttttctgcaggat
ttggatgagaagagtgtgcttagtgttaatggatctagagttactgataagatcttgcgt
atggttcctaatgtccagagttttcagacgacgctgagatgcataagatattgggctaaa
cagcgtggcatttattcgaatgttgcagggtttctgggtggtataaattgggctattctg
gttgctcggatatgccagttatacccaactgcattgcctagtttgttggtttctcggttt
ttcaaggtgtatagccaatggcggtggcctaatcctgttttgctatgtcccattgaagga
ggatctttggtgcttcagtcttgggatcctagaagaaatttcagagacaggaacgattta
atgcccataatcacaccggcatatccttgcatcaactccagttacaatgtctcttcaagt
acactctgtattatgcagcaagaatttcagaggggaaacaatatttgtgaggcaatggat
gcaagtgtgactggctggaattctctttttgagaattttcttttctttgaagcatataag
aactatctacagatagatataactgctcggaaggaaattgatttaatgaattggcaagga
tgggttgaatctcggcttcgtctgctgacttcaaagattgagagagatacaagaggaatg
ctacagtgccatccacatcctggtgaatgtttggacaaatccaaaaaattccaccgttgt
tattttatgggcttgcagcggaaaccaggtgtttgtgctcaggaaggtgaaccgtttgat
ataagctttactgttgaggaatttaagaacacagtggggatgtacacctgtaaaaagcct
gggatgtggattggtgtatgtcacataaaacgaaataatattccgctgtttgtctttcct
ggtggagttaggcctgcccgtcccaagagagtagccagggaaaatggtgctgctgctgaa
gctgatgaagccggtaatggaaagaagagaaaaatagatgaatctatcacaggccataaa
ttgagaaaatatgattctatggcagggactaggaattcacctttggcagtggaagctaaa
gtagaggattgttcaatcactgcaagatgtcctattgtggattgttcacaaagttgtcta
ggagttgaagggcctttcagatttaacccaccagtgggagcttcatcttctgttggatgt
tcatcaagctctaccgcagttgagatccttgtttctgatttagttcctgctccatctgtg
tgccagcaaggttcttccaaagaacatgacagatttcaagatgatgcgcaatcaacaggt
gaagttcaacaaaattttggtgaaggaacaagggtagagaatgacggggtacagcaagga
gtggctaccagtaaagattgctctaatatcttcaggaatgatggaggggtagaggaactt
gagcctactgcaccatcctctaatgcagtatctgctgcataccttgccccaaagccggtt
atcaagtttaattttacatctttggttagagcaaactgctag
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