Quercus lobata (valley oak): 115969302
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Entry
115969302 CDS
T07350
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
115969302
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
qlo04040
]
115969302
Ion channels [BR:
qlo04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
115969302
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Motif
Pfam:
Ion_trans
cNMP_binding
TehB
Motif
Other DBs
NCBI-GeneID:
115969302
NCBI-ProteinID:
XP_030944781
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Position
11:complement(6265451..6288564)
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AA seq
625 aa
AA seq
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MENKLLSCVAFVTLLSLAYIWCSTPVFMFRNKDIERQPLKEGEGDSSAKIMTTKTIFDPQ
GKFLRRWNVIFVLSCVIAVSVDPLFCYLPMINIKKYCIDLDKKLLITTIVLRSINDIIYL
MHIMLQFRTGFVDENLRKVGKNVLNTNAMAIARRYLKSYFVFDILVILPIPQVAISSIIS
EMRRMTSSYNIVMLNCAVIFQYVPRILQIFRSWKELIRSDEKFEENIWFKAALNFFLYLL
AGHVLGAFWYFFSFQRMMDCWHSSCEIQSGCVQTYFNCDNSRGNFSFSNDFCDISTPDTQ
FNFGIYLEALQSGVVESRQVLGKIFYGFWWGMQNLSLLGQNLKTSAYVWDNFFSVYISVM
RLFLFLYFLGNLQLAITRSEELRMKMKSEKRKKQKEKIELWSSKHDLPSDLRGPIMDNMI
QKFKEDEDVYVENLLLNLPGELQNNVKQHICLKLLENVEVLRGMDEQMLLKMCHTLTPVF
YQEHSYVIREGDPIFAIFFITNGIAWTYTTGNNGRGVLPTHAERLVEGQFFGGELLEWLR
KSTSTSRNNLSKLPISSKTLKTHTKVEAFALMADDLTKIWSYMLSRDSEPLQFEAASIIQ
RAWRVRRSKMGDAIGTSGQIQSSRA
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaaacttctgtcctgtgttgcttttgtaaccttattgtcattagcgtatatc
tggtgttctactcctgtatttatgttcaggaataaggatattgagaggcaacctctcaag
gaaggtgaaggtgattcatcggcaaaaataatgacgacaaagacaatttttgacccgcaa
gggaagttccttcgaaggtggaatgtaatatttgtattgtcgtgcgttattgcagtatca
gtggatcccttgttctgttaccttcccatgatcaacatcaaaaaatactgcattgacttg
gacaagaagttgttgatcacgactattgttttgcgatcgatcaatgatatcatttacctt
atgcatattatgttgcaatttcgtactggttttgtagatgagaaccttcgcaaagttgga
aaaaatgtgttgaatacaaatgctatggcaatagctagaaggtacttgaagtcatacttc
gtattcgacattctagttattcttccaataccacaggtggcaatttcaagtattatttca
gaaatgagacggatgacctcttcatataatattgtaatgttgaactgtgctgttatcttc
caatatgtgccaagaattctccaaatattccgatcctggaaggaacttataagaagcgac
gagaaatttgaagaaaacatatggtttaaagctgcgttaaatttctttctgtatctcctt
gctggtcacgtattgggagccttttggtattttttctcttttcaacgaatgatggattgt
tggcattcatcatgtgaaattcagagtggatgtgttcaaacatattttaactgtgacaac
agtagaggaaatttctcattttctaatgatttctgcgacataagtacaccagatacgcaa
tttaattttggaatatatttagaagcccttcaatctggtgtggtggagtccagacaggtt
ctaggaaaaatattttacggtttctggtggggcatgcaaaatctgagtttgcttggtcaa
aacctcaagacaagtgcatatgtatgggataacttcttttcggtttatatttctgtcatg
cgcttgttcctgtttttatattttttgggaaatttgcagttggcaattacaagatcagaa
gagttacgcatgaagatgaaatcagaaaaacgaaaaaaacagaaagaaaaaatagaattg
tggagttccaaacacgatcttcctagtgatttgagaggcccgattatggacaacatgatt
cagaaattcaaagaagacgaagatgtttacgtggagaaccttcttctgaatcttcctggg
gaacttcaaaataatgtaaagcagcatatctgcttaaagctactagaaaatgtagaagtg
cttcggggtatggatgaacaaatgttgcttaagatgtgccacactctcacaccagtcttc
taccaggagcacagctatgttattcgggagggagacccaatttttgcaatattcttcatt
acaaacggcattgcatggacctatacaaccggtaataatggtagaggagttttgcccaca
catgctgagcgtcttgtagaaggtcagttctttggaggagaacttctagaatggcttcgg
aaatctacctccacctccaggaataacctatccaaactccccatttcatcaaaaacgctg
aaaacccacacaaaagtggaagcctttgctctaatggcagacgacttgacgaagatatgg
tcttacatgttatcgcgagactcagagccattacaattcgaggcagcttctattatacaa
cgagcatggcgtgtgcgtagatccaagatgggtgatgccattggtacttcaggacaaatt
cagtcaagcagggcatga
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