Quercus lobata (valley oak): 115969346
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Entry
115969346 CDS
T07350
Name
(RefSeq) ruvB-like protein 1
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115969346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
qlo03036
]
115969346
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
qlo03037
]
115969346
Enzymes [BR:
qlo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
115969346
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
115969346
Chromatin remodeling factors
SRCAP complex
115969346
INO80 complex
115969346
INO80 complex (yeast)
115969346
SWR1 complex
115969346
ASTRA complex
115969346
Cilium and associated proteins [BR:
qlo03037
]
Motile cilia and associated proteins
Dynein assembly factors
115969346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
PQ-loop
AAA_22
Cdc6_lid
AAA
DUF5887
Motif
Other DBs
NCBI-GeneID:
115969346
NCBI-ProteinID:
XP_030944828
LinkDB
All DBs
Position
11:41830584..41836957
Genome browser
AA seq
415 aa
AA seq
DB search
MKNGSVRGLSVVAFELEVVGYTIALAYCLHQGLPFSAFGELAFLLVQAIILVAIIYYYSQ
PLGASTWIRALIYCAVARTILAGQIDPILFEALYVTELSPEEAESVTGGYGKSISHVIIG
LKTVKGTKQLKLDPTIYDALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEADEY
VPLPKGEVHKKKEIVQDVTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEIN
KVVNRYIDEGVAELVPGVLFIDEVHMLDMECFSYLNRALESSLSSIVIFATNRGFCNVRG
TDMNRPHGIPVDLLDRLVIIRTQTYDVADMIKILALRANVEDLVIDDESLAYLGDIGLQA
SLRHAVQLLSPSSIMAKMNGRDNIYKADIEEVKALYMDAKSSARLLQAQQEKYIS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatggaagtgtgagaggccttagtgttgtggcctttgagcttgaagtagtcggc
tacaccattgcactggcgtattgtctccaccaagggcttcccttttcagcttttggggag
ttggcgtttcttttggtccaagctataattttagttgccataatctactattattctcaa
cctttgggtgcctcaacatggatcagggcattaatatattgtgctgtagcacgtaccatc
ttggctggtcaaattgatcccattctctttgaagcactatatgttactgaactttccccg
gaagaagctgagagtgtgacaggtggctatggtaaaagtattagccatgtgatcattgga
ttaaaaactgtgaaaggaaccaagcaactgaagttggacccaaccatttatgatgccttg
atcaaggagaaggtggctgttggtgatgttatatatattgaagcaaatagtggagcagta
aagagggtgggcagaagtgacgctttcgctacagaatttgaccttgaagcagatgagtat
gttccacttcctaaaggagaggttcacaaaaagaaggagatagttcaggatgtgacacta
catgatctggatgctgcaaatgcacggcctcaaggtgggcaagatattctgtcactaatg
gggcagatgatgaagcctaggaaaacagaaatcactgacaagttaagacaagaaattaat
aaggttgttaaccggtacattgatgaaggtgtagcagaacttgtccctggagttctattc
attgatgaggtacatatgctggatatggaatgcttttcatacttgaatcgtgctttagag
agctcactgtcttcaatagtaatctttgccacaaacagagggttttgcaatgtgagaggg
actgatatgaaccgtcctcatggcatacctgtcgacttgttggaccggttggttattatc
cgaacacaaacttatgatgttgctgacatgataaagattttggctctccgtgcaaatgtg
gaggacctagtaatagatgacgaaagtttggcttacctgggtgacattggtctacaagca
tccttaaggcatgcagttcagctgttatcgccctccagtattatggcaaaaatgaatggc
cgtgacaatatctacaaggcggatattgaggaagtgaaagctctctatatggatgcaaag
tcttcagcaagacttcttcaagcgcagcaggaaaaatacatttcatga
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