Quercus lobata (valley oak): 115969624
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Entry
115969624 CDS
T07350
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
115969624
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
qlo04040
]
115969624
Ion channels [BR:
qlo04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
115969624
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Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
115969624
NCBI-ProteinID:
XP_030945172
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Position
11:complement(5848003..5870038)
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AA seq
607 aa
AA seq
DB search
MSYLSPSQENDERSLCRNENKDIDLSKKENKDIEGQCRPSKVVEFVSKSLVRLFRKWYEE
ILVLFRAFAVSLDPLFFYVPMIKEDKKCIGLNKLLWTIAIVSRSVTDVVYLVHFVVKSYK
QRGSKANTTCWEKGRRHLWSIMFNVLVILPIPQVVMPSIFSEMRRRTKSSNITILNSVIL
LQYGPRVFQIYRYWKELKRAGKTNKASLWITASLNLFLYILAGHVLGAFWYFFSIQRLAS
CWHKASKIHSDGVEISFNCDHSFRKLSFLDDFCPIDTPNTSTFDFGIFLEARRSGSLEST
GFLPKAFYCFWWGMRNLSSFGSNLQTSTYIWENIFALGISIFGLLLFLYFIGNLQIYMEW
RTTKEQKWRKRQYNLKLWLSKHRFDRKTRDKIIDYIGKSYEADEDVGVETLIPDLPTELR
RAVNRHICLELLKKLEIIKYSGLARQEQLLLKICDSLKPMFYNKHSYIVREGDPIDAVFF
ITEGIVWTYKSNNGEGSDSRHAERLEKGQYFGRELLEWVMNPTSDDMRNLSILPVSSKIL
KTHTKVEAFALMAHDFKKIWHLSLLGPKQLFQAAILIQRFWRRKRLRSQAASRVQRGRRW
WFKKTLF
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcttagcccatcgcaagagaacgacgaaaggtctttgtgcaggaatgagaat
aaggatatcgacctttcaaaaaaagagaataaggatatcgaggggcaatgtcgtccgagc
aaagttgttgaatttgtttcaaagtcattggtacgtttgttccgtaaatggtatgaagaa
atacttgtattgtttcgcgcgtttgcagtatcactggatcccttgttcttttacgttccc
atgatcaaagaagacaaaaagtgcattggcttaaacaaattgttgtggaccatagctatt
gtttcgcgatcggtcaccgatgtcgtttacctagtgcattttgtagtgaaatcctacaag
cagcgagggtcgaaggcaaatacaacatgttgggaaaaaggtcgaaggcatttatggtcc
atcatgttcaacgttctagttattctgcctattccacaggtggtaatgccaagcatattt
tcagagatgagacgacggacaaaatcttcaaatataacaatcttgaactccgtaattctt
ttgcaatatgggccaagagttttccaaatctaccgatactggaaggaactcaaacgcgca
gggaaaactaataaggcttccctatggatcacagcttcattgaatttatttctatacatc
cttgctggtcatgtattgggagccttttggtactttttctctatccaacgactagcgtct
tgctggcacaaagcttctaaaattcatagtgatggggttgaaatttcttttaactgtgac
cacagttttagaaagctctcttttttagatgatttctgccctattgatacaccaaacaca
agtacctttgattttggaatatttcttgaagcccgtcgatctggaagcttagagtccacg
ggttttctgcctaaagcattttactgtttctggtggggcatgcgaaatctaagttctttt
ggatcaaacctccaaacaagtacctacatctgggaaaacatctttgcacttggaatttct
atctttggtctgttattatttctttatttcattggaaacttacagatatacatggagtgg
agaacaacaaaagaacaaaagtggagaaaacgacaatataaccttaaattgtggttgtcc
aaacaccgctttgatagaaaaacaagggacaagattattgactacataggtaaaagctat
gaagcagacgaagacgttggtgtagagacccttatccctgatcttcctactgaacttcga
agggctgtcaaccgccatatctgcttagaactgctcaagaagctggaaatcataaaatac
agtgggttggctaggcaagaacaactgttgcttaaaatctgcgactctcttaaaccaatg
ttctacaacaagcacagctacattgttagggagggagacccaattgatgcggtattcttt
attacagaaggcattgtatggacttataaaagcaataatggtgaaggatctgactctcga
catgctgagcgtcttgaaaaaggtcagtactttggaagagaacttcttgaatgggttatg
aatcctacctccgacgacatgcgcaacctatccatactacctgtttcttcaaaaatcctc
aaaactcacacaaaagtggaagccttcgctctaatggcccacgacttcaaaaaaatatgg
catttgtcactattaggcccaaagcaattgttccaggcagctatacttatacaacgattc
tggcgccgcaagcgattgcggtcccaggcagcttcacgtgtacaacgaggacgtcgttgg
tggttcaagaaaactttgttttga
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