Quercus lobata (valley oak): 115969632
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Entry
115969632 CDS
T07350
Name
(RefSeq) protein CHROMATIN REMODELING 25
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115969632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qlo03400
]
115969632
DNA repair and recombination proteins [BR:
qlo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
115969632
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SLFN-g3_helicase
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
115969632
NCBI-ProteinID:
XP_030945188
UniProt:
A0A7N2MYN1
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Position
11:36012651..36025958
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AA seq
940 aa
AA seq
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MENEDEVEFLSVSDSTDSSEEYTADLEEEEEELDLDANNEEEDEPCVSRSVPSDQDRKSK
NVDALLRGDLVVKRQPLLPRVLSVTEAAAVCRKPFKPPCSNGYDDQNTLARRLWARKRFV
PWGSSRPALVAITNRVNVTSSAEKDVVEETVTLPPGIEPLVLWQPEESENGAANLVPIVV
DPLLVRFLRPHQREGVQFMFECVSGLCSAANIFGCILADDMGLGKTLQSITLLYTLLRQG
FDGKPMVKKAIIVTPTSLVSNWEAEINKWVGERVQLIALCESTRDDVISGIDRFISPHSS
IQVLIVSYETFRMHSSKFNHSESCDLLICDEAHRLKNDQTLTNRALATLLCNRRILLSGT
PMQNDLEEFFAMVNFTNPGILGDVAYFRRHYEAPIICGREPTATEEEKKLGAERSAELSA
KVNQFILRRTNALLSNHLPPKIVEVVCCKLTPLQSDLYNHFIHSKNVKRAITEEMKQSKS
KILAYITALKKLCNHPKLIYDTIKSGSPGTSGFEDCIHLFPPEMFSGRSGSWTGGERAWV
ELSGKMHVLARLLAHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKR
QKLVNQFNDQSKDQFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQ
KKRVYIYRFLSTGSIEEKVFQRQMSKEGLQKVIQQEQTDTTQVNFLSTEDLRDLFTFHEN
VRSEIHEKMNCIRCQNYNEKIESIEEGDENESANVNCQSDPETSDIGGFAKIAGCLHKLK
SSEKQVGTPLEEDLGSWGHHFFSTSVPDPILQASAVDEVTFVFTNQVDGKLVPIESNVNP
KMQGTEENENGFKSKPNPNKKSMLYSQHQKPLQSVLCNGDSTRSTLCTFSKPLPRSTMKS
VTTTSKDSAHVESRTNLSLGNQLPQKRLTPDTVVHDDDFE
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgaagacgaagtcgaattcctctcagtttctgattccaccgattccagcgag
gaatacaccgcagaccttgaagaagaagaagaagaactcgatttagacgctaacaacgaa
gaggaagacgaaccatgtgtgagccgttctgtaccgtccgatcaagatcggaaatcgaag
aacgtcgatgctctcttgagaggtgacctagtggtgaaaagacagccgctgcttccacga
gtcctttcagtgacagaagcagcagcagtttgtcgaaaaccctttaagccgccatgttct
aatggctatgatgatcaaaatacacttgctcgtcgtctctgggcccgcaaaagatttgtg
ccgtggggctcttcaaggccagcattggttgcaattaccaatagagtgaatgtaacaagt
agtgctgagaaggatgtagtagaggagactgtgactctgccacctgggattgagcctttg
gtgttgtggcaacctgaagaatccgagaatggggctgctaatttggtgccaatagtagtt
gacccattgcttgttcgtttccttcggccccatcaaagagaaggggttcagtttatgttt
gaatgtgtgtcggggttatgtagtgcagcaaatatatttggatgcattctggctgatgat
atgggtttgggaaagacgttgcagtcaatcaccttactgtatactcttcttcgtcaagga
tttgatgggaagccaatggttaaaaaggccatcattgtcactcctaccagtctcgtaagc
aattgggaggccgaaattaataagtgggttggagaaagagttcagcttattgctctctgt
gaaagcaccagagatgatgttatctctggaattgacaggtttataagtccacacagctcc
atacaggtgctgattgtttcatacgagacattccggatgcattcttcaaaatttaaccat
agtgaatcctgtgaccttctcatatgtgatgaggctcacaggctgaaaaatgatcagaca
ttaacaaatcgggcattggctactctcttgtgcaaccgccgtatattgttgtctggaaca
ccaatgcagaatgacctggaagagttctttgcaatggttaactttacgaatcctggaata
ctgggtgatgttgcatattttcgccggcactatgaggcacctattatttgtggaagagaa
cctactgccactgaagaagagaagaagctaggtgctgagcgctctgcagaactaagtgca
aaagttaatcagtttatattacgaaggactaatgcactattatcaaatcacttgccacca
aagatagttgaagttgtttgttgcaagttaactcctctccaatcagacctatacaatcat
tttatacattccaaaaatgttaaacgggcaatcactgaagagatgaagcagtcaaagtca
aagattttggcttatataacagctcttaagaagttgtgcaatcatccaaagctgatttat
gacaccataaaaagtggaagtccaggaacttcaggttttgaggattgtatacaccttttc
ccaccagagatgttctccggaagatctggatcgtggactggtggtgaaagggcttgggtt
gagctttctgggaaaatgcatgtcttagcccggctattggctcatctacgtcagaggact
gatgatcgtattgtccttgtgtcaaactatactcagacactggacctttttgctcagttg
tgtcgtgaaagaagatacccatatttgaggctggatggaacaacatcaattagtaaaaga
cagaagttagtgaatcaatttaatgatcaatcaaaggatcaatttgtgttcctcttgagc
agcaaggctggtggttgtggcctcaatttgattggtggaaatcgactagtcttgtttgat
cctgactggaatccagcaaatgataaacaagctgctgcaagagtatggagggatggacaa
aagaagagagtatacatctacagatttttgagtacaggatcaattgaagaaaaggtgttc
cagcgtcagatgtcaaaagaagggcttcaaaaagttatccagcaagagcaaacagataca
acgcaggtgaactttctttcaacagaagatctacgtgatcttttcacatttcatgagaat
gtgaggtctgaaattcatgaaaagatgaactgcatccgttgccaaaattacaatgaaaag
attgagagcatagaagagggagatgaaaatgaatcagcaaatgtaaattgtcaatccgat
ccagaaacctcagatataggtggatttgcaaaaattgctggatgcttgcataagttaaag
agctcggagaaacaggtagggactcctctagaagaagatttaggtagttgggggcatcat
ttcttctcaacatcagtacctgatcctatattgcaagcttcagctgttgatgaggtgaca
tttgtttttacaaaccaagtggatgggaaacttgtacctattgagtccaatgtaaaccca
aagatgcagggaacagaagaaaatgagaatggtttcaaatcaaagccaaacccgaacaaa
aaatccatgttatattctcaacatcaaaaacctctgcaatctgttttgtgcaatggagat
tctaccaggagcacattatgtacattttccaagcctttaccaaggtcaactatgaaatca
gtgactactacttctaaagattcagcacatgtagaatcgaggactaatctctctcttgga
aatcaattaccccaaaaaagattgactccagatactgtagtacatgatgatgattttgag
tga
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