Quercus lobata (valley oak): 115969776
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Entry
115969776 CDS
T07350
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115969776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qlo03041
]
115969776
03032 DNA replication proteins [BR:
qlo03032
]
115969776
Spliceosome [BR:
qlo03041
]
Complex A
U1 snRNP components
Sm proteins
115969776
U2 snRNP components
115969776
Complex B
U1 snRNP components
115969776
U4/U6.U5 tri-snRNP components
115969776
Complex C
U2 snRNP components
115969776
DNA replication proteins [BR:
qlo03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
115969776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
115969776
NCBI-ProteinID:
XP_030945248
LinkDB
All DBs
Position
12:28474456..28477247
Genome browser
AA seq
109 aa
AA seq
DB search
MSKPMDEDTTGGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNM
VLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagccaatggatgaggataccactggaggcaagaatgaggaagaggaattcaac
accgggccactctctgttctgatgatgagtgttaagaataacacacaggtgctcattaac
tgccgaaacaacaagaagcttctaggtcgtgtgagggcatttgatcgtcactgtaacatg
gttcttgaaaatgtcagggagatgtggactgaggtaccaaagactggtaaaggcaagaag
aaagctcaacctgtcaacaaagataggtttatcagtaagatgtttcttcggggagactct
gttatcatcgttcttaggaacccaaagtga
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