Quercus lobata (valley oak): 115969804
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Entry
115969804 CDS
T07350
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
qlo03016
]
115969804
Enzymes [BR:
qlo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
115969804
Transfer RNA biogenesis [BR:
qlo03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
115969804
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Methyltransf_25
Methyltransf_31
Methyltransf_12
Methyltransf_11
Motif
Other DBs
NCBI-GeneID:
115969804
NCBI-ProteinID:
XP_030945279
UniProt:
A0A7N2N5N6
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All DBs
Position
12:34317362..34320872
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AA seq
468 aa
AA seq
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MEERRCKFWLPKKNRFCANLPLHDSLFCGNHNPRSNGQWIPCPLDPSHSVLKENLDWHVK
RCPLLKQVQSLTLQPFYQKGINAGRDNDDEEEEEEKVEDLVAINKPGSESLDNISSEMKR
RAVYGMSAPDFCKLIEKIEAVHGLICKDIRDSYKMPEACNVWMKREIDRKLPFQEKHVMQ
QASILGNLEEFGVLKNAIGRAQCDCEEASEDEKNGVSAVVEFGAGRGYLTQMLADCYGIK
RVFLVERKSYKLKADRSLRQKESLILERLRIDIEDLNLNAVESLRGSPYLAIGKHLCGPA
TDLTLRCCLAEHFSQNSVKHCSANRNLRGLAIATCCHHLCQWKHYTSKKYLSHLGITKEE
FHAITWFTSWAVDADHGSDLPEVPDVKLHLESIENKECGGDASGVEDIVRNMKAVERAVL
GFMCKQIIDMGRLMWVKECGLETEFVKYVPSSISPENHLLIARHTNQF
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaggcgctgcaaattctggcttcccaaaaagaacagattctgtgccaacctc
cctctccacgattccttgttctgtggcaaccacaaccccaggtccaatggccagtggatt
ccatgcccacttgatccttctcactctgtgctcaaagaaaatcttgattggcatgtgaag
agatgcccattactcaaacaagttcaatccttgactctccaacccttttatcaaaagggt
atcaatgctggcagagataatgatgatgaagaagaagaagaagaaaaggttgaagatttg
gttgcaataaataagcctggttcggagtctttggataatatatcttctgaaatgaagaga
cgtgctgtttatggaatgagtgcgcctgatttctgtaaattgattgagaagattgaggct
gttcatgggttaatatgtaaggatatccgggactcatataagatgccagaagcttgcaat
gtatggatgaagagagaaatagataggaaattgccatttcaggagaaacatgttatgcaa
caggcatcgattctagggaacttggaagaatttggggtgttgaagaatgctattgggagg
gcacaatgtgattgtgaggaggcatctgaagatgagaaaaatggtgtctctgcagtggtt
gaatttggtgcaggaagagggtatttgacacaaatgcttgctgattgttatgggatcaaa
agggtttttctagttgagcggaagtcatacaagctgaaggctgatcgatccttgcgacag
aaagagagcttgatattagagcgtttgagaattgacattgaggatttaaacttgaatgct
gttgagtctttacgaggatctccttacctggctattggtaaacatctttgtgggcctgct
acagatttgactctaagatgttgccttgctgaacattttagtcagaatagtgtcaaacac
tgcagtgctaatcggaatctgagaggtctagctatagcaacatgttgccatcatctttgc
cagtggaaacactatacaagtaaaaaatatttatcacatttggggatcaccaaggaagaa
tttcatgcaattacatggtttaccagctgggcggtagatgctgaccatggttcagatctt
cctgaagttcctgatgtcaaattgcatctagagtcaattgaaaataaagaatgtggtgga
gatgcaagtggagttgaagacattgtgaggaacatgaaagcagttgaaagggcagtcttg
gggtttatgtgcaagcagattattgacatgggaagattgatgtgggtcaaggaatgtggt
ttagaaacagagtttgtcaaatatgttccatcaagcatttctcctgaaaaccatttactg
attgccagacatactaatcaattttga
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