Quercus lobata (valley oak): 115970069 Help Entry 115970069         CDS       T07350                                  Name (RefSeq) splicing factor 3B subunit 1   KO K12828   splicing factor 3B subunit 1 Organism qlo  Quercus lobata (valley oak) Pathway qlo03040   Spliceosome Brite KEGG Orthology (KO) [BR:qlo00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     115970069  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:qlo03041]     115970069    03036 Chromosome and associated proteins [BR:qlo03036]     115970069 Spliceosome [BR:qlo03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     115970069  Complex B     115970069  Complex C    U2 SnRNP specific factors     115970069 Chromosome and associated proteins [BR:qlo03036]  Eukaryotic type   Chromatin remodeling factors    B-WICH complex     115970069 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N HEAT_ECM29 Htt_N-HEAT_1 HEAT_2 Cnd1 XMAP215_CLASP_TOG Vac14_Fab1_bd Adaptin_N UME TAF4 Motif Other DBs NCBI-GeneID:  115970069 NCBI-ProteinID:  XP_030945598 UniProt:  A0A7N2N3X7 LinkDB All DBs Position 12:3831291..3835591 Genome browser AA seq 1278 aa AA seqDB search MDPEIAKTQEERRKMEQQLASMNSLTFDTDLYGGNDRDSYVTSIPVNEDEDNLDSLMDNE VARKLASYTAPKSLLKEMPRGSDENDDVSGFKKPQRIIDREDDYRKRRLNRVISPERHDA FAAGEKTPDPSVRTYADVMREEALKREKEETLKLIAKKKKQQQEEEEAAPEKPPADSSAA AAAAPKRRNRWDQSQDDGGAGAAAAKKAKTASTSDWDLPDTTPGRWDATPTPGRLGDATP SASVGRRNRWDETPTPGRVVDSDATPAAGGVTPGATPAGMTWDATPKLSGLATPTPKKQR SRWDETPATMGSATPMAGATPAAVTPGVTPVGGLDLATPTPGAINLRGAITPEQYNLLRW EKDIEDRNRPLTDEELDAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPE ENRGQQFDVPKEAPGGLPFMKPEDYQYFGALLNEEEEEKMTSDELKERKIMKLLLKVKNG TPPQRKTALRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELV RPYVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNT TARAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLV EIIEHGLLDENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFL KAIGFIIPLMDALYASYYTKEVMVILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIR SDILPEFFRNFWVRRMALDRRNYRQLVDTTVEIANKTGVADIVGRIVEDLKDESEPYRRM VMETIEKVVTNLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVK PYLPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEY PEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRG AEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQER QNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYI YAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHV INAVMEAIEGMRVALGAAIVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPT LEDEQNNVYSRPELMMFV NT seq 3837 nt NT seq  +upstreamnt  +downstreamnt atggacccagagatcgccaagactcaggaggagcggaggaaaatggagcagcaattagcc tccatgaattccctcaccttcgacaccgatctctacggcggaaacgaccgcgactcctac gttacctccatccctgtcaacgaggacgaggacaacctcgattccctcatggacaacgag gtcgctcgcaaattggcctcctatactgctcccaaatccctcctcaaagagatgcccagg ggttccgacgagaacgacgacgtttcgggcttcaagaagccgcagcgaatcatcgaccgc gaggacgattatcggaagcggaggttgaatcgtgtcatctcgccggagaggcacgacgct ttcgccgccggcgagaagactccggacccttcggttaggacttacgccgatgtcatgaga gaggaggcgttgaagagagagaaggaggagactttgaaactcatcgctaagaagaagaag cagcagcaagaggaagaggaagccgcccccgaaaagccgccggcggattcttctgcggcg gcggcggcggcgcccaagagaaggaaccggtgggaccaatcgcaggatgatggcggtgcc ggtgctgctgctgctaagaaggccaagactgcgtctacgtcggattgggacttgccggat accactcccgggcggtgggatgcgacgccgactcctgggagattaggcgatgctacgccg tctgcttccgtggggaggaggaataggtgggatgagactccgacgccggggagagtggtg gattcggatgcaacaccggcagcaggcggtgttaccccgggggcaacaccggcgggtatg acttgggatgccacaccaaagctatcgggtcttgccacgccgacgccaaaaaagcagagg tcgaggtgggacgaaacgccggctactatggggagtgcaaccccaatggctggggctacg ccggctgcagttacgcccggtgttactccggttggcgggcttgatctggcaaccccgact cctggagcaattaatttgcgtggagcaatcacgccggagcagtataatttgttgaggtgg gagaaggatattgaggacaggaataggccattgacagatgaggagttggatgcaatgttt ccgcaagaggggtataagattttggacccgccggcatcctatgtgccaattaggactccg gcgaggaagctgcttgctaccccaaccccgatggggactcctctgtatgccattccggag gagaatcgtgggcagcagttcgatgtgcccaaggaagcgcctggtgggttgccattcatg aagcctgaggattaccagtactttggggcattgttgaatgaggaggaggaagagaaaatg acttctgacgagctgaaagagaggaagattatgaagcttctgcttaaggttaagaatggg acaccaccgcagagaaaaacggctttgaggcagcttaccgataaggcaagagagtttggg gctggcccgttgtttaaccggattctgccattgcttatgcagcccactttggaggaccag gagaggcatcttttggtgaaggttattgacagagtgctttacaaacttgatgaattggta cgcccttatgttcataagattcttgttgtgattgagcctttattaattgacgaggattac tatgcgcgtgttgagggtagagagattatttctaatcttagtaaagctgctggtttggct actatgattgctgctatgcgcccggatattgataatatagatgaatatgttaggaacacc actgcaagagctttcagtgtggttgcttctgctcttgggattcctgctctcttgcccttc ttgaaggctgtctgtcaaagtaagaaatcttggcaagctaggcacaccgggattaagatt gttcagcagattgccattttgattggttgtgccgtgcttcctcatctgaggtccctcgtg gaaatcattgagcatggtttgcttgatgagaatcagaaggtgaggacaatcactgcgttg tctttggctgctcttgctgaggctgctgccccatatggtattgagagctttgactcggtg ttgaagcctttgtggaaggggatcaggtctcaccgtgggaaagtgttggctgcattcttg aaggcaattggttttattattccgcttatggatgcgctgtatgcaagttactatactaag gaggtgatggtcattctgattcgtgagttccagtcaccagatgaagaaatgaagaagatt gttctgaaggtggtgaagcagtgtgtgagtacagagggtgtggaggctgattacattcgc agtgatatacttcctgaattctttaggaatttctgggtcaggaggatggctttggatagg agaaactataggcaacttgtggacacaacggtggagatagcaaataaaactggtgttgcc gatatagtagggagaattgttgaggatcttaaagatgagagtgaaccttacagacgaatg gttatggaaaccatagaaaaagtggttacaaacttgggtgcatctgatattgatgctcgg ttagaggagcttcttattgatggaatcctttacgccttccaagagcagaccagtgatgat gccaatgtgatgcttaatgggtttggtgcagttgtgaatgcacttgggcagagagtgaag ccttacctaccccagatttgtggtaccattaaatggcggttgaataacaagagtgcaaag gtgagacagcaagcagctgatctcatttcaaggatcgctgttgtcatgaagcagtgtcaa gaggaacaactgatgggtcatcttggtgttgtcttgtatgagtatctgggagaagaatat cctgaagttctgggatcgattctgggagctctgaaagcaattgtcaatgttattggtatg acaaagatgactcctcctataaaggatttgcttcctagattgacaccaattttgaagaat aggcatgagaaagtccaggagaactgcattgaccttgttggacgaattgctgaccgcggt gctgagtttgttccggcgagggagtggatgaggatttgctttgagcttcttgagatgctt aaagcccacaagaagggtattcggcgagccacggtgaacaccttcggatacattgccaaa gccattggaccacaagatgtcctggctaccctattgaataatctcaaggtgcaagagcgg cagaaccgtgtgtgcacaactgtggcaattgccatagttgcagaaacctgctctcccttt acggtgctgccagccttgatgaatgagtatcgtgtaccagagcttaatgtgcagaatggt gtcttgaaatccctctcttttctatttgagtacattggtgaaatgggaaaagactacatc tatgctgtgaccccattacttgaagatgccctcatggatagggatttggttcacaggcag actgcagcttctgctgtcaagcatatggctttgggggttgctggtttgggttgtgaggat gctttagtccatttgctgaactacgtgtggccaaacatatttgagacttcccctcacgtg attaatgctgtcatggaagccattgaaggaatgagggtggccttgggtgctgctattgtt ctaaattactgccttcaagggctattccatcctgcccgtaaggttagggaggtctactgg aagatttataactcactatatattggagcacaagatgcgcttgtggcggcttatcctaca ctggaggatgagcagaacaacgtatacagtaggcctgagttaatgatgtttgtctaa

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