Quercus lobata (valley oak): 115970982
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Entry
115970982 CDS
T07350
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03030
DNA replication
qlo03420
Nucleotide excision repair
qlo03430
Mismatch repair
qlo03440
Homologous recombination
qlo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
115970982
03420 Nucleotide excision repair
115970982
03430 Mismatch repair
115970982
03440 Homologous recombination
115970982
03460 Fanconi anemia pathway
115970982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
qlo03000
]
115970982
03032 DNA replication proteins [BR:
qlo03032
]
115970982
03400 DNA repair and recombination proteins [BR:
qlo03400
]
115970982
Transcription factors [BR:
qlo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
115970982
DNA replication proteins [BR:
qlo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
115970982
DNA repair and recombination proteins [BR:
qlo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
115970982
MMR (mismatch excision repair)
115970982
DSBR (double strand breaks repair)
HR (homologous recombination)
115970982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
zf-CCHC
RADX
DUF936
DUF223
zf-CCHC_2
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
115970982
NCBI-ProteinID:
XP_030946494
UniProt:
A0A7N2N0Z7
LinkDB
All DBs
Position
12:775887..779828
Genome browser
AA seq
881 aa
AA seq
DB search
MAMNLTEGAIMKMCRGELKAEDEGVKPILQVIEVMQVVTKAQQQPTNSSSTERYRVVLSD
GTHQQQGMLATQKNHFVKDGKLQKGSIVRLTHFVCNEVQRRMIIIIVDLDLIIEKSDLIG
EPVPVAKPVVVQSPAGQPGTGTGNPQSFPGTSPVGGLVNKPNAAGASMEPPRINQSYGSA
YSHNSDSGRYAAPNVPAAYPKIESSAGYPGSVSLGGSYGEQSFRNPRSEASRPPLNSSAR
QPQPVYQQPSSMYTNRGPIARNEAPPRIIPIAALNPYQGRWTIKARVTAKGELKHYNNPR
GDGKVFSFDLLDSDGGEIRVTCFNAVADQFFNQIEVGKVYLISKGSLRPAQKAYNHLPND
QEIFLESTSMVQPCSDDDSSIPQQQFHFRHISDIEGMDNNSIMDIIGIVTFIGPPASIMR
KNGTETQRRILHLKDMSGRSVELTLWGNFCNAEGQSLQNMCDSGLFPVLAVKAGRVNDFN
GKSLGTISSSQLFIEPNYPEAHSLRRWFDEEGRNIPSVSISREVSVGRTDIRKTISQIKD
ERLGTSEKPDWITVSATIAFIKVDSFCYTACPIMIGDRQCNKKVSNNGDGKWRCDRCDQS
VEECDYRYILQCQIQDHTGITWVTVFQECGEEIMGIPAKQLYFLKYEEQDDDKFGEILRK
VLFTKYIFKLKVKEETFSDEQRVKSTVVKADKVNFSSESRFLLDLMEKLKAGNYSSIASK
AESITPNPGLNNTSVGNIGYRQPTPPVVNYTGNSINSGKEFSAPLHQVGQYGNQYNSYAM
AATGTPGSYLQCNSCGGAGHSSANCPSIMNGPGQSMGGGYASRVSSGPSVGGSSGECFKC
HQPGHWARDCPGLSTVPPAYGSSGVTPGRYGGVSKQQFGGY
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgaatctgacggaaggagcgataatgaagatgtgcagaggggaactgaaggcg
gaggatgaaggggtgaagccaatactacaagtgatagaagtgatgcaagtggtgaccaaa
gcccaacaacagcccaccaacagtagcagtactgagcggtatagggttgttctctccgac
gggacccaccagcaacagggcatgttagccactcagaaaaaccatttcgtcaaggatggc
aagttgcagaaaggctccattgttcgcttgacccacttcgtctgtaacgaagtccaaaga
cgcatgattattatcattgttgatttggatttgataattgagaaaagtgatctcattgga
gaacctgtaccagtggcaaaacctgtggttgtacaatccccagctggccaaccagggaca
ggaactgggaatccccaatcatttcctggaacttcacctgttggtggtctggttaataaa
cccaatgcagctggagcatctatggagcctcctagaataaatcaatcatatggcagtgct
tattctcataattctgactcaggtagatatgctgcaccaaatgtgcctgctgcttaccct
aagatagagtctagtgctggatatcctggatcagtgtcgttaggtggttcatatggtgag
cagagtttccgcaaccctagatcagaagcttcgcggccacctctaaattcctctgcccgc
caacctcaacctgtgtatcaacaaccatcttcaatgtacactaacagaggaccaatagct
agaaatgaagctccccctaggataattcccattgctgctctgaatccataccagggtagg
tggacaattaaggctagagttacagcaaaaggagaacttaagcactacaataacccccgc
ggtgatggtaaagtattcagttttgatcttcttgattctgacggtggagaaattcgggta
acttgctttaatgctgtggctgatcaattcttcaaccagattgaagttggaaaggtttat
ctgatttccaagggaagcttaagacctgctcaaaaagcttataaccacctcccaaatgac
caggaaattttcttagagagcacgtcaatggtacagccttgctctgacgatgacagctca
attccacagcagcagtttcacttccgtcatataagtgatattgaaggcatggacaacaac
agcattatggacattattggtattgtaacttttatcggtccccctgcttcaataatgaga
aaaaatggtactgaaactcagcggagaatcctacacttgaaggatatgtctggccgaagt
gttgaattaactctgtggggaaacttttgcaatgcagaaggacagagtctgcaaaatatg
tgtgattcagggcttttccctgttctagctgtgaaagcaggtagagtaaatgacttcaat
gggaagtcattgggtactatctcttccagtcaactatttattgagccaaattatccagaa
gctcacagcctgagaagatggtttgatgaggaaggaaggaacatcccatctgtctcaatt
tccagggaagttagtgtgggtaggacagatattcgaaagactatatcgcaaattaaggac
gagaggctaggaacatccgagaagccagattggatcactgtcagtgcaaccattgcattc
ataaaggttgacagtttctgctacacagcgtgtcctatcatgattggtgatcgacaatgc
aacaaaaaggtttcaaataatggggatgggaaatggcggtgtgataggtgtgatcagtca
gttgaggaatgtgactacaggtatatactccagtgccagatacaagaccatactggcata
acatgggtaaccgtatttcaggaatgtggtgaggagatcatgggtattcctgcaaaacaa
ttgtattttctgaagtatgaagagcaagatgatgataaatttggagaaatccttcgtaag
gttctttttactaaatatatattcaagttgaaagtaaaggaggagacatttagtgatgaa
caacgtgtaaagtcaacagtggtcaaggcagataaggtgaatttttcatctgaatccaga
tttcttttggatttgatggaaaagctgaaagcagggaattatagttctattgcttcaaag
gctgaaagtatcactcctaaccctggattgaataatacttcagttgggaatattggatat
aggcaaccaacgccaccagtggtgaactatactgggaacagtatcaattctggtaaagag
tttagtgcaccattacatcaagttggtcagtatggaaatcagtataatagttatgccatg
gctgcaactggcactcctggttcatatctacaatgtaacagttgtgggggtgctggtcat
agctctgcaaattgtcctagtattatgaatggtcctggacagtccatgggagggggctat
gctagtagagtttcttctgggccaagtgttggtggaagctctggtgaatgctttaaatgc
catcaacctgggcattgggcaagagattgtccggggttgagcactgttcctccagcttat
ggcagcagtggcgttacgcctgggagatatgggggtgtttcaaagcaacaatttggtggc
tattga
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integrated database retrieval system
