Quercus lobata (valley oak): 115971026
Help
Entry
115971026 CDS
T07350
Name
(RefSeq) TMV resistance protein N-like
Organism
qlo
Quercus lobata (valley oak)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIR
NB-ARC
TIR_2
AAA
AAA_16
AAA_22
ATPase_2
NACHT
nSTAND3
LRR_4
LRR_8
AAA_14
AAA_18
ABC_tran
AAA_33
KTI12
RNA_pol_Rpb1_3
RNA_helicase
RuvB_N
AAA_19
Motif
Other DBs
NCBI-GeneID:
115971026
NCBI-ProteinID:
XP_030946549
LinkDB
All DBs
Position
12:33279078..33292739
Genome browser
AA seq
1132 aa
AA seq
DB search
MASSSFSFSSISSTHQWNYDVFLSFRGEDTRYDFTRRLHETLCDKDFNTFIDNDLPRGEE
ISIELLEAIESSKVSIIVLSENFASSSWCLDELVKILECRKNIGQLVVPVFYKVDPSEVR
GQKREFGVALTKHEEKFKNNIDKVQNWRMALKEVGGLSGWHYKNGDTEAKFIQTIVENIP
KYTAMLVEKYLVGVEPRVKDVESLLRMELDEFRIVVIHGLPGIGKTTIAKAVYNRIAKYF
HRSSFLEHVRETSKTEDGIIKLQGQLLKEILGDENLKIHSTSKVINLIKNRLRSKNVLIV
LDDVDKLKRIEKLLGNFDWFTSRSRVIITTAADPQLLAPLGKVYTTYEVKELDEREALQL
FEKHAFPGKNPNKDYFELTNQVIQYAQGLPLAVVIIARDLCGRTKHEWESALHKYNEIPN
KDIQKVLEVSYYGLDGNEQDIFLDIACFFKGWTKDYVVDILNGCDLFADDGIPRLVNKCL
ITVDHSGKLLMHDLIQKMGREVVRQESTHILGKRSRLWHHKDALEVLIGNKGSGKIRGIM
LHPRVLVHVPLHPDVFKRMENLKLLLVDNIHIGEAIQNLPNGIRFLSWPKYPFLLPSNFY
PQQLVCLDMPCSRIELEGLCNRVFPLENMKHLNLRGCKFITELPELCTPNLERLDISYCE
NLVEIHGSGEFLHKLKTWNLTRCKKLQNFPNNLMLTSLEVLEKLFLLECDNLRVLPDGVY
KLQQLRELLTPTAKLRLTCNSFDSSSGYGFLNMTELHLAYNTSIIELDLLMKPDYFPALY
RIDLSCTNIITIPKSISRFPRLKLLRIEGCNHLREIQGLPQSISGVYAEYCPLLDYESLL
NQVIEIMGILPNGVCGSARSNELMDPQFTDYESETEGAESEDWDTSLFTDPFRLEIEGSE
YEDGDIARILTVSGTEIPWFNHQSVENNSILFWVGRKFPKLAVYIAFAGDEDDGIPYMYK
CFVYISINGCKRRECMPRHLLPNTCNILQLCCPRQCFLQQKLNESNPTDQNRVEVTYKII
GYNQEDGASVGTLKATRWGVHVECICPPQESGIPNLPLLTAGHDDDDDVHYWSELPFHGS
DDLEAEEDEKYRSPLVLHETSSSCMSWLVGPSTMLFMLFLFMQFRFCCPRDF
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcttctttttctttttcttctatttcttccactcaccaatggaactatgat
gttttcttaagctttagaggggaagatacccgctatgattttacaaggcgtttacatgaa
actctttgtgacaaggattttaacaccttcattgataatgaccttccaagaggagaagaa
atttcaattgaacttcttgaagccattgaatcatcaaaagtttcaatcattgtgttatct
gaaaactttgcttcttcttcttggtgtttggatgaacttgtcaagattcttgagtgtaga
aaaaatattggccagttagttgtacctgttttttacaaagtggacccatcagaagtacgt
ggtcaaaagagagagtttggggtggccttgacaaaacatgaagaaaaattcaaaaataat
attgacaaggtgcagaattggaggatggctttaaaggaagttggtggtttgtctggatgg
cactataagaatggtgacactgaagctaaatttatccaaacaattgttgaaaatatacca
aaatacacagcaatgcttgttgaaaaataccttgttggagtagaacctcgtgtcaaggat
gtagaatcgcttttaagaatggagttagatgaatttcgcatagtagtgattcatggcctt
cccggaataggcaagactacaattgcaaaagcagtttataacagaattgctaaatatttt
catcgaagcagttttttagagcatgttagagaaacttcgaagacggaggatggcattatc
aaactacaaggtcaacttcttaaagagattttaggggatgaaaatttgaaaattcacagc
acatccaaagtaatcaatttgataaaaaatagacttcgtagtaaaaatgttcttatagtt
cttgatgatgtggataaattgaaaagaatagaaaaattgcttggaaattttgattggttt
acttcaagaagcagagtcattataacaacagcagcagatccacaattgttagctcctctt
ggaaaagtttatacaacttatgaggtcaaggaattggacgaacgtgaagctcttcaactc
tttgaaaagcatgccttccctggaaagaatcccaataaagattattttgaacttacaaac
caagttatacagtatgcccaaggccttccactcgctgttgtaataatagctcgtgatttg
tgtggaagaactaaacatgaatgggaaagtgcattacataagtataatgaaattcccaat
aaagacattcaaaaagtacttgaagtaagttattatggactggatggaaacgaacaagat
attttcctcgatattgcatgtttcttcaagggatggaccaaggattatgttgtagatata
ttaaatggttgtgatttatttgcagatgatggtattccaagacttgttaataaatgtctc
attactgtggatcattctggtaaattgttaatgcatgacctaatacaaaaaatgggtagg
gaagttgttcgacaagaatctacacatattcttggaaaacgtagcaggttatggcatcat
aaagatgctcttgaagtactaattggaaataaggggtcaggcaaaattcgaggtataatg
ttgcatccacgtgtactagtacatgtgccactacacccggatgttttcaaaaggatggaa
aatctcaagttacttcttgttgataacatacatattggtgaagcaattcaaaatcttccc
aacgggataagatttcttagttggcctaaatatccatttctcttgccatccaacttttat
cctcaacaacttgtttgtctcgatatgccatgtagtcgcattgagttggaagggctatgc
aatcgggttttcccgttagaaaatatgaaacatctcaatctccgtggttgtaaatttata
accgaattacctgaattatgcaccccaaatttggagagattggacatttcttattgtgaa
aatttagttgagattcacgggtccggtgaatttcttcataagcttaaaacgtggaatctt
actcgttgcaaaaaacttcaaaattttccaaacaacctcatgttgacatctcttgaagtt
cttgagaaattattccttttggaatgcgataaccttcgggttcttccagatggcgtttat
aaattgcaacagcttcgggagttgttgactcctactgcgaaattgagactgacatgcaat
tcttttgatagctcctccggttatgggtttctgaacatgacagagctgcatcttgcttac
aatacaagcataattgaattagatcttttgatgaagcctgattacttccccgcattgtat
cgtatagatctatcttgtaccaatattattaccatccccaaaagcattagcagatttcct
agattaaaattacttcggattgagggttgcaatcaccttcgtgaaattcaaggacttcca
caatcgataagtggtgtttatgcagaatattgcccgttgttggattatgaatcgctattg
aatcaggtaatagaaattatggggattttaccgaatggagtatgtggtagtgcaagaagc
aatgaattaatggatccacagttcaccgattatgaatctgaaactgagggtgctgaatct
gaagattgggacacatcactgttcaccgatcctttccgacttgaaattgagggctctgaa
tatgaagatggggacattgctcgtattcttacggtatcgggaactgagattccatggttc
aatcatcaaagtgttgaaaataattcaatattgttctgggttggtcgcaaatttccaaaa
ttggctgtctatattgcttttgcaggcgatgaggatgatggtatcccctatatgtataaa
tgctttgtttacatttccatcaatggttgtaaaagacgtgaatgtatgcctcggcattta
cttccaaatacttgtaatatcctgcaattatgttgtccacgtcaatgctttctacagcag
aaattgaatgagtcaaatccaactgaccagaatcgtgttgaggttacatataaaataatc
ggatataatcaggaagatggtgcatctgttgggacactaaaagccacaaggtggggggtc
cacgtagagtgcatctgtcctcctcaagaatctggtatacctaacttgccccttctaact
gctggacacgatgatgatgatgatgttcattactggagcgagttgccatttcatgggtct
gatgatttggaagcagaagaagatgaaaaatatcggtctcctctggtccttcatgaaaca
tctagttcgtgcatgagttggctagttgggccatccaccatgctttttatgctattcctt
tttatgcaattccgcttttgctgccccagagatttttga
DBGET
integrated database retrieval system
