Quercus lobata (valley oak): 115971086
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Entry
115971086 CDS
T07350
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
115971086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qlo04121
]
115971086
Ubiquitin system [BR:
qlo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
115971086
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
DUF7885
LRR_4
LRR_NXF1-5
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
115971086
NCBI-ProteinID:
XP_030946635
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Position
12:24227452..24231278
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AA seq
594 aa
AA seq
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MKMMMGSSFPEEVLEHVFSFIERDRDRNAISTVCQSWYEIERWSRRRVFVGNCYAVSPAI
LIKRFPDVRCLELKGKPHFADFNLVPEGWGAYVAPWIEAASKAYPGLEEIRLKRMVISDD
TLKLISKSFKNFKVLVLSSCEGFSTKGLAAIAADCRNLRELDLRESEVEDLNQSSGHWLS
RFPDNYTSLVSLNIACLNSEVSFTALECLVGRCPNLRTLRLNRAVPFDRLAILLRRAPQL
VELGTGEASDLRPDVFSPPDVFSNLSGAFSGCKELKSLSGFWDVAPGYLPVVYPICPRLT
SLNLSYAATIQSSDLIKLVSQCQNLQKLWVLDYIEDLGLEELAASCKYLRELRVFPSEPF
GAEPNVLLTEQGLVSVSEGCPKLHSVLYFCRQMSNEALRTIARNRPNMTRFRLCIIEPRT
PDYLTLEPLDVGFGAIVEHCKDLRRLSLSGLLTDRVFKYIGTYGKKLEMLSVAFAGDSDL
GLHHVLSGCENLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSFGACKLLGQKMP
MLNVEVIDERGPPDSRPESCPVEKLYIYRTVSGPRFDMPGFVWTKDKDSALGLS
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgatgatgggtagttcgttccctgaagaagtgttggaacacgtgttctctttc
atagagagagacagagacaggaacgcgatctcgaccgtgtgtcaatcgtggtacgagatc
gaacgttggagccggaggagagtgttcgtgggcaactgctacgctgtcagccccgcgatc
ttgatcaaacggttcccggacgtgaggtgtttggagctcaaaggtaagccacacttcgct
gatttcaacctcgtacccgaaggttggggcgcctacgtggccccgtggatcgaggcggct
tccaaggcttatcctgggctcgaagagattcggttgaagcgcatggtcatctcggacgac
accttgaaactcatttctaagtcgttcaagaactttaaggttcttgtgctttcttcttgt
gaaggtttttcgactaaaggacttgctgccattgctgctgattgcaggaatttgagagag
ctggacttgagggagagtgaagtggaggacttgaatcagtctagtggacattggctcagc
cgttttcctgataactacacctcactggtgtcccttaacattgcctgtttgaactctgag
gtgagcttcacagccttggaatgcctggtgggtaggtgccccaacctgaggactcttcgg
ctcaatcgtgccgtgccctttgacaggcttgcaatcctacttcgtcgggcacctcagttg
gttgagttaggcactggggaagcgtctgacttgcgaccagatgttttctcgccaccggat
gttttctcgaacctatcgggggcattctctgggtgcaaagaacttaagagcctgtctggt
ttttgggatgtagccccaggttatcttccagttgtttatcctatctgtcctaggttaacg
tcgttgaacttgagctatgcagccactatccaaagttctgatcttatcaagctagttagc
caatgtcagaatttgcagaaattatgggtgctggattacattgaagacttgggcctagaa
gaacttgcagcatcttgcaagtatcttcgagaattgagggtatttccgtcagagccattt
ggtgcagaaccaaatgtattgttgacagaacagggacttgtctctgtttctgaaggctgc
ccaaagctgcattcagttctgtacttctgccgtcaaatgtctaatgaggccttaaggacc
attgccaggaatcgacctaacatgacaaggtttcgtctttgtattattgagccacggact
cctgattaccttacccttgaaccacttgatgtgggatttggagccattgttgagcactgc
aaggatctaaggcggctttccctttctggtcttcttactgatcgagtgtttaagtacatt
gggacttatggcaaaaaattagagatgctgtctgtggcttttgctggagatagtgatctg
gggctccatcatgtactctctggttgtgaaaaccttagaaaacttgagattagggactgc
ccctttggtgacaaggctcttttggccaatgctgcaaagctggagacaatgcgatccctt
tggatgtcttcttgctctgtgagtttcggagcatgtaagctgctaggtcagaagatgccg
atgcttaatgttgaggttattgatgagaggggccccccagattcaagaccagaaagctgt
ccagttgagaagctctacatatataggactgtctctggaccaagatttgacatgcctggt
tttgtttggacaaaggataaagattctgcattggggctttcctga
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