Quercus lobata (valley oak): 115971092 Help Entry 115971092         CDS       T07350                                  Name (RefSeq) HBS1-like protein isoform X1   KO K14416   elongation factor 1 alpha-like protein Organism qlo  Quercus lobata (valley oak) Pathway qlo03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:qlo00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     115971092  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:qlo03019]     115971092 Messenger RNA biogenesis [BR:qlo03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      115971092 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 GTP_EFTU_D4 MMR_HSR1 Zn_ribbon_RanBP Mg_chelatase Motif Other DBs NCBI-GeneID:  115971092 NCBI-ProteinID:  XP_030946640 LinkDB All DBs Position 12:24910524..24918796 Genome browser AA seq 797 aa AA seqDB search MPRKVNYGVDYDEEVNDYEGYDYDYDYDYDYDDDIEDNGKAPQSEQETSKRGLWRCSVCT YDNDEGLFACDICGVLNPSKTGTNIDKQTVKGMCKNSGASKMAKSLFASLPQRIPKKAVS LQKQNDVFVKEEGNNSHKHMNIQGQFHEFHKAFSIHSYHHVNIAPFKFDVPSPDDLVSNG LRSSKMGSKANFNDMNFSRVSSGITGKNGLLNIKSNAERSDVSSSLMLKGKQDSFDDNNC SKNKAHNVQSSLKISDGSFATMPKGRHHNVDEGSCSKNDMANILSSDKSSHSSPALKLKG RHEITGDSSSSLISGGKPQSLNSSLNKMALGEGSGFSNNVNARGTRSQAEYKPEKWMLND QAEDTLIQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKEMHKYEKEAKLQGKGSFAYAWA LDESAEERERGITMTVAVAYFDSKKYHIVVLDSPGHKDFVPNMISGATQADAAILVIDAS IGAFEAGMDGAKGQTREHAQLIRSFGVDQIIVAINKMDVVDYSKERFDLIKQQLGTFLRS CGFRDPSIMWIPLSAMENQNLVVASSDVRLLSWYHGPYLLDAIDSLQPPTRDLSKPLLMP ICDVIKLPSLGQVSACGKVEAGALRSGSKVLVMPSGAVGSVRSLERDSQACTSARAGDNV AVSLQGIDAGNVMAGGVLCHPDFPVAVAKRLELKVLVLDITTPILIGSQLEFHIHHAKEA GRVAKILSLLDPKTGKVTKKTPRCLTAKQSAVVEVALQGPVCVDEFSNCKALGRVFLRAL GRTIAVGIVTRIIESQE NT seq 2394 nt NT seq  +upstreamnt  +downstreamnt atgcctcgtaaagtaaactatggagttgattatgatgaagaagttaatgactatgaaggt tatgattatgattatgattatgattatgattatgatgacgacatagaagacaatgggaaa gcacctcagtcagagcaagaaacttctaagcgtgggctttggcgttgctctgtatgcact tatgataatgatgagggtttgtttgcttgtgatatttgtggggtgctaaatccttcaaaa actggcaccaatattgataagcaaacagttaagggcatgtgcaaaaattctggagcatcc aaaatggccaagtctctttttgcatcattgccgcaacggatacccaaaaaggctgtatca ttacaaaagcagaatgatgtttttgtgaaggaagagggcaataactcccacaagcatatg aatatccaaggacaatttcatgaattccataaggcttttagtattcatagctatcaccat gttaatatagcccctttcaagtttgacgttccatccccagatgatttggtttctaatgga ctacgctcctctaaaatgggttcaaaagccaactttaatgacatgaatttttcaagagtt tcctcaggcatcactgggaagaatggtctacttaatataaaatcaaatgctgaaaggtca gatgtgtcatcatcattgatgctgaaaggcaaacaagatagttttgatgacaacaattgt tcaaagaacaaggctcacaatgtacagtcaagtctaaaaatttcggatggctcatttgca accatgccaaaaggcagacatcataatgtggacgagggtagttgttcaaagaatgatatg gccaacatactatcaagtgataaaagctctcatagctctcctgcattgaaactgaaaggc agacatgaaattacaggtgatagcagtagttctttgattagtgggggcaagccacaaagc cttaacagtagtttgaacaaaatggctcttggtgagggatctggattttcgaataatgtg aacgctagagggactcgttcacaagcagagtataaacccgaaaagtggatgctcaatgac caagctgaagatacattgattcaactgaatcttgcgattgtaggtcatgttgattctgga aaatcaacactctctggtagacttctacaccttttggggcgaatatcccaaaaagagatg cacaaatatgaaaaggaggcaaagttacagggcaaggggtcctttgcttatgcttgggca ttggatgagagcgctgaagaaagggaaaggggaataaccatgacggttgctgttgcttat tttgattccaaaaaatatcatattgttgtgcttgactcaccaggccataaggattttgtt ccaaacatgatatctggggcaacacaagctgatgctgcaattcttgtgatagatgcctca atcggtgcatttgaagctggtatggacggtgccaagggacaaacacgggaacatgcacaa cttatcagaagttttggtgttgatcaaattatagttgcaattaacaaaatggatgttgtg gattactcaaaggaacggtttgatttaattaaacagcaacttggaacatttctccgttct tgtggttttagagatccttctataatgtggatcccattgagtgccatggaaaatcaaaat ttggtggtggcttcttctgatgttcgtctgttgtcttggtatcacggaccttatctgttg gatgcaattgattccctccaacctcccacaagagacttgtcaaagcctctgcttatgcct atatgtgatgttattaaattgccttcactagggcaggtgtctgcctgtggtaaagtagaa gctggagcccttcggagtggatccaaggttctagttatgccatcaggggctgtggggtca gtacgttccttagagcgtgactctcaggcttgtacttctgcaagagctggagacaatgtg gctgttagtctgcaaggcattgatgcagggaatgtgatggccgggggtgtgctatgtcac ccagattttcctgttgccgttgcaaaacgtttggaactgaaggtccttgtcttggatatt acaaccccaattttaattggttcacagttggaatttcatatacaccatgcaaaggaagct ggaagagtggccaaaatattgtctttgcttgatcctaagactggcaaggtgacaaagaag acaccgcgctgtcttactgcaaagcagagtgcagttgttgaggtggctttgcagggacca gtgtgtgtggatgagttttcaaattgtaaagctcttgggagggtgtttttaagagcatta ggaagaactattgctgttgggattgtaacccgaataattgagtctcaggagtag

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