Quercus lobata (valley oak): 115971100
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Entry
115971100 CDS
T07350
Name
(RefSeq) bromodomain and WD repeat-containing protein 3
KO
K11797
PH-interacting protein
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qlo04121
]
115971100
Ubiquitin system [BR:
qlo04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
115971100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
NBCH_WD40
Bromodomain
MFMR_assoc
Motif
Other DBs
NCBI-GeneID:
115971100
NCBI-ProteinID:
XP_030946653
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All DBs
Position
12:19994788..20015158
Genome browser
AA seq
1680 aa
AA seq
DB search
MDIRKCISPTVAPSLTMAPLKFSNRLHEKAQPEKEQGATGQVVESGVDIDLREIYFLIMH
FLASGPCQRTFEQFCNELLENQLLPRRYHAWFSRSGAHSGDGDDDGVSFPLSYHNLVERY
PHIEKDHLVKLLKQLIVSAAPPLLGKVGGNTPNAADVPTLLGTGSFSLLDCGRNMETKQV
KPLRAYLRWPHMQADEVRGLSLREIGGGFTKHHRAPSIRSACYAIAKPSTLVQRMQNKMK
LRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMDTAFCLASCRGHEGDITDLAVSSNNA
LVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIVFSPRPSAIYQLLSSSDDGTCRIWD
ARYSNLKPRVYMPKPSDILNGKSNGLSSNGSSSSNGPQSHQILCCAYNANGTVFVTGSSD
TFARVWSAFKCTQEDLDQPVPELDVLSGHENDVNYVQFSGCAVASKSSMADSLKEENIPK
FKNSWFCHDNIVTCSRDGSAIIWVPRPRRSHGKVGRWTRAYHLKVPPPPLPPQPPRGGPR
QRFLPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHTESSYVLDVHPF
NPRIAMSAGYDGRTIVWDIWEGTPIWTYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLN
TGQGESQKDAKLDQFFLGDYRPLIRDSSGNVLDQETQLPPHRRNAQDPLCDSSMMPYPEP
YQSMFQKRRLGALGIEWQPSSIKYAVGLDFGPAQDDHMLPLVDLERMIEPLPEFIDAMYW
EPENEVISDDTDSEYNVAEENSSEGDHGSISASSSSDPECSAEDSEVEHSHKDSLRRSRR
KRLKAEVELMTSSGRRVKKRNLDECHGTISGSNRMKKSRSCRKVSKRKSSKAKIMRPQRV
AALNALNMFSQITGTSSDEEDENGSENDSSDSESVLQDSDIQSNESDANLQNMQQKCTKE
EHSSLDGLTDVAKLQASSESQSIVGNKRRLVLKFSLRDSKKHVSPEDTRLKCDNEAGLVN
PFSRSQEATREDRTDQSSIDPMSSFTDIIDVELSQTRNDCMDRVQHGKAEDHLEACTGDE
ENKKRWEDVMPRDASTELNANFDVQKENNTEVNGDEKQFGTDRSQNLDTARNKDHAYPDG
ALISESLLPGDHQPKADASAASFNGNFNTGYIDDSLEINKVVGTNHSNEPKEDAPLRSTK
LIIKTKKRIVMDPKTPSKLKFVTAVEDQSSARGVLKPESQLYRDPNLVLKVPEQGEATGR
LRHSYSDIRMSDAAYGDENTAVNDHHDLETDVIETSTDAIRRTRSMKMKATSRDPNAVNR
NFKVRRGHTSEGTSRNAENLSLEFSGQLLQRSRSTRYQRGGYNDNEPSFSTRRKPNYSVR
KLSWLMLSEHEEGYRYIPQLGDEVVYLRQGHEEFLESSDPREVGNLRSRNRNLSAVEICR
VEALDYGSQPGSGESCCKIKLRFVDHSSVGFDKTFKLVLPELIDFPDFVVEKTRYDAAIG
RNWTHRDKCLVWWRNPNGEGGKWWEGRITFSKAKSEEFPDSPWERHAVCYRSDSGGNHLH
CPWELHDPDNSWEHPHIDDNIRDKLLYYFAKLEQAGNKDAYGIAKLNQAALKSEFCNRFP
VPLYPELICLRLKNDYYRSLEAVKHDIRVMLSNAESYFPNSEQGRLKRLSDYFDRKLSKL
NT seq
5043 nt
NT seq
+upstream
nt +downstream
nt
atggatattaggaagtgcatatctcctactgttgcaccttctcttaccatggcgcctttg
aaattttcaaataggctgcatgagaaggctcaacctgaaaaagaacagggagctactggt
caggttgttgagtctggagttgatatagaccttagagaaatttactttttgattatgcat
ttcctggcctctggtccatgccagaggacttttgagcaattctgcaatgaacttttagaa
aatcaacttcttcctagaagatatcatgcctggttttcaaggagtggtgcacacagcggg
gatggcgatgatgatggcgtctcttttccgttgagctaccataatctagtggagaggtat
cctcacattgagaaggatcacttggtaaagcttctgaagcaactaatagtgagtgcggcc
cctcctttgcttggcaaggttggaggaaacactcccaatgcagctgatgttcctacgtta
ctgggaactggttccttttcgcttctggattgtggtaggaatatggaaaccaagcaagtt
aagcctttgcgagcttacctacgatggccacacatgcaggctgatgaagttcgtgggcta
agtttaagggaaattggaggaggattcaccaagcatcatcgtgctccatctattcgctct
gcatgttatgcaattgctaaaccatcaaccctggtgcaaaggatgcaaaataagatgaag
ctaagggggcatcgtaatgctgtctactgtgccatttttgataggtcaggacgatatgta
atcactggttctgatgatcgtcttgtcaagatttggtcaatggatacagcattttgcttg
gctagctgtcgaggacatgaaggtgacattactgacttggctgtaagttcaaacaacgct
ttagtggcatctgcttcaaatgactttgttattcgagtttggcgtttgccagatggaatg
ccgatttcagttttgagggggcatactggagctgttactgctattgtatttagtcccagg
ccaagtgccatataccagcttttatcgtcatcggatgatgggacttgtcgaatctgggat
gctcggtattccaacctcaagccacgagtatacatgccgaaaccttcagacattctaaat
gggaagagcaatggtctgtcaagtaatggatcctcctcaagtaatggtccacagagccat
cagatactttgttgtgcttacaatgccaatggaaccgtttttgttactggtagctctgac
acttttgcaagggtttggagtgcttttaaatgtacccaagaggacctggatcaaccagta
cctgagttggatgtgttgtctggccatgagaatgatgtcaattatgtgcaattcagtggt
tgcgctgttgcctcaaaatcttcgatggccgactctttgaaggaggagaatattccaaag
ttcaaaaattcctggttttgtcatgacaacatagttacctgttctcgtgacggcagtgca
attatttgggttccaagaccacgtagatcccatggaaaagttggacgttggacacgggct
tatcatctaaaagttccacctcctccattgcctccacaacctcctcgaggaggcccacgc
cagagatttcttccaaccccccgtggtgttaatatgattgtatggagtctggataaccgc
tttgtgcttgcagctatcatggattgcagaatatgtgtttggaatgctgttgatggtagc
ttagttcactctttgacaggtcacactgaatcttcatatgttttggatgttcatcctttc
aatccccggatagctatgagtgctgggtatgatgggcgaactattgtgtgggatatttgg
gagggcacacccatatggacctatgaaattggacgttttaagttggttgatgggaagttt
tccccggatgggacatcaattgtactttcagatgacgttggccaaatatatttgctaaac
acaggtcaaggcgagtcccaaaaagatgccaaattggaccagtttttccttggggactat
cgcccccttatccgtgattcttcgggaaatgttcttgatcaggagactcagcttcctcca
catcgcaggaatgctcaagatcctctttgcgattcaagtatgatgccatatccggaaccc
tatcagagtatgtttcagaaacgtagacttggtgcattgggcattgagtggcagccttca
tcaataaaatatgctgttggtctagatttcggtcctgctcaggacgatcatatgctgccc
ttggtagatttggaaagaatgattgagccactaccagagtttatagatgccatgtactgg
gaaccagaaaatgaagtcataagtgatgatactgattcagagtacaatgttgctgaggaa
aattccagcgaaggtgaccatggaagtataagtgccagctcttctagtgatccagagtgc
agtgcagaagacagtgaggttgaacacagtcataaagatagccttcgcagatcaagaagg
aaaagactcaaagctgaagttgagttaatgacttcttctgggaggcgagtcaagaaaagg
aatttggatgagtgtcatggcactatatcagggagtaacagaatgaagaaatcaagaagt
tgtcggaaagtttcaaagaggaagtcttctaaagctaagattatgagaccccagcgagtt
gctgcactcaatgccctgaatatgttttctcaaatcactggaacatcatcagatgaagaa
gatgaaaatgggtcagaaaatgattcatcagatagcgagtcagtgctccaagattcagac
atccaaagcaatgagtctgatgcaaacttgcagaatatgcaacagaaatgtactaaagag
gaacattcatcattggatgggttaactgatgtagccaagcttcaagcatcttctgaatct
caatcaattgttggaaacaagcgaagattggtcctaaagttttcacttcgtgattctaag
aagcatgtgtctccagaagacacaagattaaaatgtgacaatgaggctggtttggttaat
ccattctctagatctcaagaagccactcgagaagacaggacagatcaaagctccatagat
ccaatgtcatctttcactgatataattgatgtggagctttcccagactagaaatgattgc
atggatagagtgcaacatggaaaggctgaagatcatttggaggcatgcacaggtgatgag
gagaataagaagaggtgggaagatgtcatgcccagagatgcatctactgaactgaatgca
aattttgatgtccaaaaggaaaacaacactgaagttaatggggatgagaaacagtttgga
actgacaggtcacagaatctggacactgcaagaaataaagatcatgcttatcctgatggt
gcactcatatctgagtcattactcccaggtgaccaccaaccaaaagccgatgcttctgcg
gcctcatttaatggaaatttcaacacagggtacatagacgattcactggaaataaataaa
gttgttggcacaaaccactcaaacgaaccaaaagaagatgctccacttaggtcaacaaag
ttaataattaagacaaagaaaaggatagtgatggatcccaaaactccttccaaactgaaa
tttgttactgctgtggaagaccagtcaagtgctagaggtgttttaaaaccagaaagtcaa
ctgtacagggatcccaatctagttttgaaagtaccagaacagggtgaagctactggcaga
ttacggcattcatattcagacattaggatgtctgatgctgcttatggagatgaaaataca
gctgttaatgaccatcatgatttggaaactgatgtcattgaaacttctactgatgcaata
cgtagaacaagatccatgaagatgaaagcaacttcccgggatccaaatgctgtgaaccgt
aactttaaggtgcgaaggggccacacatcagagggcacatctagaaatgcagaaaacctc
tccttggaattttctggccagcttcttcaaagatcaagatctacaagatatcaacgtggt
ggatataatgataatgaaccaagtttttccactcgaagaaaaccaaattattctgtcagg
aaattatcatggcttatgttgtcagagcatgaggagggctaccgttatattcctcagcta
ggcgatgaagttgtatatttgagacagggccatgaagagtttctagaatcaagtgaccca
cgggaagtaggtaatttgagatcaagaaatagaaatttgagtgctgtggaaatttgcagg
gttgaagcccttgattacggctcacaaccaggttctggggaaagctgctgtaaaatcaaa
cttagatttgtagatcactcttctgttgggtttgataaaacgttcaaattggttctgcct
gaactgattgatttccctgattttgttgttgagaaaacgcggtatgatgctgctattggg
aggaattggactcatagggataaatgcctagtttggtggagaaatccaaatggggaaggt
ggtaaatggtgggaaggtcgaattactttttcgaaggccaaatctgaagagtttcctgac
agtccttgggaaagacatgctgtatgctacaggagtgattctggaggtaaccatctacac
tgtccttgggaactgcacgatcctgacaattcatgggagcatccccatattgatgacaac
ataagagataagctcctgtattattttgctaaattggagcaggcaggaaataaggatgct
tacggaattgcaaaattgaatcaagctgctctgaagtcagaattctgtaacaggtttcca
gttccgttgtaccccgaactcatttgcttgaggttaaagaatgactactatcggagcttg
gaagctgtgaaacatgatataagagtgatgctgtccaatgccgagtcttacttcccaaat
tctgagcagggtaggttgaagcgcctgtcagattattttgacaggaaattgtcaaagttg
tag
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integrated database retrieval system
