Quercus lobata (valley oak): 115971198
Help
Entry
115971198 CDS
T07350
Name
(RefSeq) transcription factor MYC2-like
KO
K13422
transcription factor MYC2
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo04016
MAPK signaling pathway - plant
qlo04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
115971198
04075 Plant hormone signal transduction
115971198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
qlo03000
]
115971198
Transcription factors [BR:
qlo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
115971198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH-MYC_N
HLH
bHLH-TF_ACT-like_plant
PUMA_CC
DUF7050
bHLH_INO4
bHLH_SAC51
Snapin_Pallidin
Bap31_Bap29_C
Motif
Other DBs
NCBI-GeneID:
115971198
NCBI-ProteinID:
XP_030946814
UniProt:
A0A7N2N1X5
LinkDB
All DBs
Position
12:5168137..5170863
Genome browser
AA seq
695 aa
AA seq
DB search
MTDYRLTTTSTTPMNLWTSDDNASVIESFMSSDLSSFWPPPPSQQPQLHHQLSSAASTSA
PTPAPIVSQSQPSVALFNQETLQQRLQALIEGARESWTYAIFWQSSYDYPSSASVLGWGD
GYYKGEDDKSKSKAKNKASSSAAEQEHRKKVLRELNSLISGSAAPVTDDAVDEEVTDTEW
FFLVSMTQSFVNGGGLPGQAFFNSTPIWVTGADRLVSSPCDRARQGQVFGLQTMVCIPSA
NGVVELGSTEVIYQSSDLMNKVRVLFNFNSLEMGSWPINDQGENDPSSLWLNDPTSTPPV
TTATEIKDSLNNDSTVTVPSVPGSTATTTTTNNLQISKGIPFENPSSSSLTENPSAIHIQ
NSSQSRQQQAQNEGFFTRELNFSDYGYDNNSVVKNGNNSISTMKPESGEILNFGESKRSS
YVSGHSQFAAEESNKKKRSPTSRGSNEEGMLSFTSGVILSSGVVKSSGGVGTADSDHSDL
EASVVKEADSSRVVDPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVP
NVSKMDKASLLGDAIAYINELKGKLQSTDSEKEEMQKQLDALKKELASKESRYPGSGSPP
SLPDHDPKMSKLIDLDIDVKIIGWDAMIRIQCSKKSHPAARLMVALKELDLDVHHASVSV
VNDLMIQQATVKMGSRFYTQDQLRLALSAKVGDCR
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgacagattaccgtttaacaacgacatcaacaacgccaatgaatctttggacctcagac
gacaacgcatcggtgatcgagtctttcatgagttccgatctctcatctttttggccacca
cctccttcgcaacaacctcaactccatcaccagctatcttctgcagcttcgacctcagca
cccacacccgcccccatcgtctctcaatcgcaaccctccgttgctctcttcaaccaggaa
accctccaacaacgcctccaagctttaatcgaaggcgctcgcgagagctggacctacgct
atcttttggcagagctcctacgactatcccagcagcgcctccgttttgggttggggtgat
gggtactacaaaggcgaggacgacaagtccaaatccaaagccaagaacaaagcttcgtcg
tctgcggccgagcaagagcaccggaagaaagtcctccgggagctcaattctttgatttct
gggtcggcagccccggttactgatgatgctgttgacgaggaggtcaccgacactgaatgg
ttctttttggtgtccatgactcagagtttcgttaatggcggcggtctccccggtcaggct
tttttcaattccaccccgatttgggtcaccggagccgaccgcttagtgagctcgccgtgc
gaccgggctcgccagggtcaggttttcgggctccaaactatggtttgtataccctctgca
aatggggttgtggaattgggatccacggaagtgatttatcagagctcggatctgatgaat
aaagtcagggttttgttcaatttcaatagcctggaaatgggttcttggccgatcaacgac
cagggtgaaaacgacccgtcttcgctttggctcaatgatccgacatcgactccgccggtg
acgacggcgactgagatcaaagactccttgaataacgatagtactgttactgttccatcg
gttccgggctccaccgcaaccaccaccaccaccaacaacctccagatttcgaaggggatt
ccgtttgagaatcctagttcgagtagtttaacggagaatccaagcgcgattcatatccag
aacagcagccagagccgccagcaacaagcgcagaacgaggggttcttcaccagagagttg
aacttttcggattatgggtatgataataacagtgttgtgaagaatgggaacaattcaatt
tcgacgatgaagcctgaatcgggtgagattttgaatttcggggagagcaagaggagctcc
tacgtttcaggtcattcccagttcgcggcggaggagagtaacaagaagaagcggtcgccg
acatcaaggggtagcaacgaagagggaatgttgtcttttacatcgggtgtcattttgtcg
agcggtgtggtgaagtctagcggcggtgtcggcacggccgattccgatcattcagacctc
gaagcatcggtggtgaaggaggctgatagtagcagagtcgtagacccggagaaacggccc
cggaaacgtggtcgaaaacccgctaatggtagagaagaacctctgaatcatgtggaagca
gagaggcagagaagagagaagcttaaccagaggttctatgccctccgagctgtggtccca
aatgtttctaaaatggacaaagcatcactcctcggtgacgctattgcgtatataaacgag
ctgaaagggaagctccagagtacggattcggagaaggaagagatgcagaagcaattggat
gcattgaagaaggaattggcaagcaaagagtcacgctatccgggctcagggtcgccacct
tcgcttcctgatcatgacccaaagatgtcgaagttgatagatttggatatcgatgtgaag
ataatcggatgggatgcgatgatcaggatccaatgtagtaagaagagccacccagcagcg
aggttgatggtggcgttgaaggagctagacttggatgtgcaccacgccagtgtgtcggtt
gtgaatgatttgatgattcaacaagctacggttaagatggggagtcggttttacacgcag
gaccagcttaggctagcgctatcagccaaagttggcgattgccgataa
DBGET
integrated database retrieval system
