Quercus lobata (valley oak): 115971223
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Entry
115971223 CDS
T07350
Name
(RefSeq) vacuolar protein sorting-associated protein 51 homolog
KO
K20296
vacuolar protein sorting-associated protein 51
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qlo04131
]
115971223
Membrane trafficking [BR:
qlo04131
]
Protein recycling
Others
EARP complex
115971223
Endosome - Golgi transport
Tethering complex
GARP complex
115971223
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS51_Exo84_N
Sec5
Dor1
COG5_N
EXOC6_Sec15_N
COG2_N
Codanin-1_C
Motif
Other DBs
NCBI-GeneID:
115971223
NCBI-ProteinID:
XP_030946853
LinkDB
All DBs
Position
12:19959854..19972268
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AA seq
785 aa
AA seq
DB search
MGVDDLPMDDKAKRMRDLLSSFYSPDPSISPSPDSPSSRPQQITLDDINSTSFDPDHYMN
FLVEKSNLEGLLQRHVEMAAEIKNLDTDLQMLVYENYNKFISATDTIKRMKTNIVGMESN
MEGLLEKIMSVQSRSDGVNTSLFEKREHIEKLHRTYNLLRKVQFIFDLPMRLGKCIKSEA
YADAVRFYIGAMPIFKAYGDSSFQDCKQASEEAMAIIIKNLQGKLFSDSESIQARAEAAV
LLKQLDFPVESLKARLLEKLAQSLEDLQLKTKELSNASVDSKDSSKEESIPCSEPAAAHE
ASVREFAEALRAYCVIFPDSENQLVKLAQDLVTKHFETTGEYVKERICSAELLRVLRVIW
KDVLLMDEVLHEAALPDYSLEAAKVAVKQYVASKFSHLLHDISDALTKVHVRQKDGGKEY
SLQVVLETSKKAVLQGSMDVLLDFRQILEDNLELLVNLKDLIIDLVQEGFQDFFRALDDH
FLLLSGRNISPSQDQGLIEGTQGDKAFAGLVLVLAQLSVFIEQTAIPRITEEIAASFSGG
GVRGYENGPAFVPGEICRIFRSAGEKFLNLYIKMRTQRISLLLKKRFTTPNWIKHKEPRE
VHMFVDLFLQELGAIGREVKQILPQGLRRHRRNDSNGSTASSRSNPLREEKLTQSNTQRA
RSQLLETHLAKLFKQKVEIFTKVEYTQESVVSTIVKLSLKSLQEFVRLQTFNRSGFQQIQ
LDIQFLRTPLKENVEDEAAVDFLLDEVIVGASERCLDPIPLEPPILDKLIQAKLARTRDQ
IPSAS
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcgacgatctcccaatggacgacaaggcgaagcgaatgagagatctgctctca
agtttctactctcccgatccttcaatatctccctctcccgattcgccgtcgtctagacct
caacaaatcaccctcgacgacatcaactccacctccttcgatcctgatcactacatgaat
ttcctggtggaaaagtcgaatttagaagggctgctgcaaaggcatgtagaaatggcagcc
gagattaagaatctcgatactgacttgcaaatgttggtttatgaaaattataacaagttt
attagtgctaccgatacgattaagaggatgaaaactaacattgtaggcatggagtcaaac
atggaagggcttcttgagaagataatgtctgtgcaatctagaagtgatggggtgaacact
tcactatttgaaaagagagaacacatagagaaattgcatcgcacgtataaccttcttcgt
aaagttcagttcatttttgatctacccatgagacttggaaagtgtatcaaatccgaggcc
tatgctgatgcagtcaggttctacattggagctatgccaatttttaaggcatatggagac
tcatcattccaggactgtaagcaagcttctgaagaagcaatggctataattataaagaac
ttgcagggaaagctattctcagattctgaatccatacaagcaagagctgaagctgcagtg
cttcttaagcagttagattttccggtggaaagcttaaaggctagactactggaaaaattg
gcacaatctcttgaagatcttcagcttaagactaaagaactaagcaatgcttcagtagat
tctaaggattcttctaaagaagaaagcattccttgttcagaacctgctgctgctcatgag
gcatctgttcgtgagtttgcagaggctctccgtgcttattgtgtgatatttcctgattca
gaaaaccaactagttaaacttgcacaagatctggttaccaagcattttgaaacaactgga
gaatacgtaaaggagcggatttgttctgctgagctattgcgtgttcttcgagttatttgg
aaagatgtgcttctgatggatgaagtgttgcatgaggctgcactccctgattattctttg
gaggctgccaaggttgctgtcaaacagtatgttgccagtaaattttcccatcttctacat
gatatctcagatgcccttacaaaagtacatgttagacaaaaggatggaggaaaagagtat
tccttgcaggttgttctggagaccagcaaaaaggcagtgcttcaaggcagcatggatgtc
ttactggacttccgccaaattcttgaagacaacttggagctactagtcaacctgaaagat
ttgattattgatttggttcaagaaggatttcaagatttcttcagggcacttgatgatcac
ttccttctgctttcaggaagaaatatttcacccagtcaagatcaaggtttgatagaggga
acacaaggtgacaaagcttttgctggccttgtcctggtgcttgctcaactttctgttttc
atcgaacaaactgccatcccaagaatcactgaggaaatagcagcttctttttctggtggt
ggtgttaggggctatgaaaatgggcctgcctttgttcctggagaaatttgtcgaattttt
cgttcagctggagagaagtttctgaacctttatataaaaatgagaactcagaggatatca
cttcttctgaaaaagaggtttacaacaccaaattggatcaagcataaggagcccagagag
gttcatatgtttgttgatttatttctccaagagcttggagcaataggacgtgaagtaaag
cagattttgcctcaagggctgcgaaggcatcgtcgcaatgacagcaatgggagcactgcc
tcatcaaggagcaatccattacgagaggaaaagttgactcagtccaatacccaaagggcc
aggagccagcttttggaaacccatctagcaaagttgttcaagcaaaaagttgaaattttc
acaaaagttgaatacacacaggagtccgtggtatcaacaatagtaaaactgtcccttaaa
agtttgcaagaatttgtccgactccagactttcaatcggagtggattccagcaaattcag
ttggatattcagttcctaaggactcctttaaaggaaaatgttgaagatgaagctgctgtt
gactttcttcttgatgaggtgattgttggtgcttcggagcgttgtcttgacccaattcct
ttggagccccccattttggacaaactaatacaggcaaagttggcaagaaccagggatcag
attcctagcgcttcataa
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