Quercus lobata (valley oak): 115971320
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Entry
115971320 CDS
T07350
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
115971320
Enzymes [BR:
qlo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
115971320
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
115971320
NCBI-ProteinID:
XP_030947036
UniProt:
A0A7N2RF25
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Position
12:complement(39771637..39779998)
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AA seq
669 aa
AA seq
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MDIIKHPRTALKSLFSPKKVPEGGDKGSNMSNVGVRLHIQDRYVTMDNGIVQVTLSNPGG
IVTGIRYNRIDNLLEVLNKETNRGYWDLVWSAPGSKGIFDVIYGTSFRVVVENEDQVELS
FTRMWDPSLEGKSVPMNIDKRFILLRGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKD
KFRYMAVADNRKRCMPLPDDRGQGRCQILAYAEAVLLVNPTNPEHKGEVDDKYQYSSENK
DIKVHGWISNSPPVGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAMFLSSHYAGQDLDPK
FRGGEPWKKVFGPIFIYLNSASDGDDPLWLWEDAKIQMMNEVQKWPYSFPASEDFQKSDQ
RGNVGGRLLVLDRYTSKDYMPANGAYVGLAAPGDVGSWQRECKDYQFWTRADEGGYFSIN
NIRTGDYNLYAWVPGFIGDYRYDVSITISSGSHVEMGDLVYEPPRDGPTLWEIGIPDRSA
AEFYVPDPNPEYINKLFVNHPDRFRQYGLWGRYAELYPDTDLVYTVGVSDYSKDWFFAQV
PRKKDDNTHQGTTWQIKFILNGVDRRSTYKLRVALASATLAELQVRINDPNAKRPLFTSG
LIGRDNSIARHGIHGLYWLYNVNVPGAQLVEGENTIFLTQPRSTSPFQGLMYDYIRLEGP
PSFNVKDEL
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggacatcatcaaacatccaagaactgcattgaaatctttgttttctcctaaaaaagtt
ccagaaggtggtgacaaaggttccaacatgtcgaatgtaggagtgaggttgcatattcaa
gatcgttatgtaacgatggataatggcatagtccaagtgacactatcaaatccaggtgga
atagttactgggatacgatataatcgtattgacaatttgcttgaagttcttaataaggaa
actaatagagggtattgggaccttgtctggagtgcaccagggagcaagggaatatttgat
gtgatttatggaacaagttttagggttgtagtggaaaatgaggaccaggtcgagctctca
tttacaagaatgtgggatccatcccttgagggaaagtctgttcccatgaatatagacaaa
aggtttatattgcttcgtggttcttcaggcttctactcttatgctatttatgaacacttg
aaggattggcccgattttgacattggtgaaacgaggatcactttcaaactcagaaaagac
aagtttcgctacatggccgtagcagacaataggaaaagatgcatgcctcttcctgatgac
cgaggtcaaggaagatgccaaatccttgcctacgctgaagctgttctacttgtcaaccca
actaatccagagcacaagggagaggtggatgacaagtaccaatactcctctgagaataaa
gatattaaagtacatgggtggatatctaatagcccacctgttggattctggcaaatcaca
cctagtgatgagtttcgatctggtggacctctcaaacaaagtctaacctcccatgtgggc
cccaccacccttgcgatgtttcttagttctcattatgcgggacaagacctggatccaaaa
ttcagaggtggtgagccatggaagaaggtctttggcccaatatttatttatcttaattct
gcatctgatggagatgatccgctttggctatgggaggatgctaaaatacagatgatgaat
gaagtccagaagtggccttatagttttccagcatctgaggatttccaaaagtcagatcaa
cgtggcaatgttggtggtagactacttgtcctagataggtatactagcaaagattatatg
ccagcaaatggtgcttatgttggcttggctgcaccaggagacgttggatcatggcaaaga
gaatgcaaggactatcagttttggacgagagcagatgagggaggctatttttccatcaac
aatatccgtactggtgactataacctctatgcgtgggtccctggttttataggagattac
cgatatgatgtttccattaccatatcctcaggttctcatgttgaaatgggcgatcttgtg
tatgaacctccaagagatggacctacattgtgggaaataggtatccctgatcgttctgct
gcagaattctatgttcctgatcccaatccagagtacattaacaaactgtttgtcaatcat
cctgacaggttcaggcagtatgggttatggggtaggtatgctgaattatatcctgataca
gacttagtctatacagtcggtgttagtgattatagtaaagattggttctttgctcaggtt
cccaggaagaaagatgataacacacatcagggaacaacctggcaaataaagttcatactt
aatggtgtggatcgcagaagtacctacaaactgagggttgcactggcatctgcaactctg
gctgaattacaggtacggattaacgatccaaatgcaaagcgccctctatttacaagtgga
ttaatagggagggacaactcaattgctagacatgggattcatgggctctactggctatac
aacgtgaatgtaccaggtgctcagcttgttgaaggagaaaataccatctttttgacgcaa
ccaagaagcaccagccctttccagggtcttatgtatgattacattcgtttagaaggcccc
ccttcttttaatgtcaaagatgaactctga
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