Quercus lobata (valley oak): 115971381
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Entry
115971381 CDS
T07350
Name
(RefSeq) flowering time control protein FCA isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qlo03041
]
115971381
Spliceosome [BR:
qlo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
115971381
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
WW
Motif
Other DBs
NCBI-GeneID:
115971381
NCBI-ProteinID:
XP_030947128
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Position
12:19019527..19030586
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AA seq
557 aa
AA seq
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MERQRGDRFNGQQESQHQNQQLSDHHSHHEQQQQQQHHFNNSNYQVQDQQHLNNPNYHSN
YHHHDQHFNNSNYQQHPPHHHNHHQHVNFEPNDSSSFGSGGFPPNSGAGGYGSGSGSGSG
SGSAYSVRKRGRHRGDTPDSVDGFGNVKLYVVPVSRTATEGDIRPVFEEHGNVVEVVILK
DKRTGQQQGSCFVKYATVDEAERAIRSLNNQYTFPGEHAPLTVKYADRERERLGVVDKLY
VGCLNKDASKMEVEEIFSAYGPIEDVYIVRDELKQSRGCGFVKFSHWEMALAAIKALNGT
FKMRGCDQPLIVRFADPKKPKIGEPRGNHIFANTNFAPCSQEPFARNMVAPSLGKSMGGC
ILPNASYPLRPNSSSSLPQSVSQMEKQEPFMQQSFPPLQQLPSQLAQMPLQQTRTPQTSS
QSSQLEGSEVQRQSHQTGKVEQQPSSQSPTVASSSTSPAVPLSPYITTSLECDWSEHTCP
DGHKYYYNCVTRESRWMKPQEYSLHEHQLLKHQNLQNPSHQLQPSLPSSQQVIQIEQELD
HVQLQSESSPVIGPTCA
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggcagagaggagaccgattcaatgggcagcaagagtcccaacaccaaaaccag
caactctccgatcaccatagccaccatgaacaacagcagcagcagcagcatcatttcaac
aattccaactaccaggtccaggaccagcagcaccttaacaaccctaactaccattcaaac
taccaccaccatgaccaacacttcaacaattccaactatcaacaacatcccccccaccat
cacaatcaccatcaacacgtgaactttgagccaaacgattcgtcgtcgtttggctctgga
ggtttccctcccaatagtggtgccggtggatatggttctggttctggttctggttccggt
tccggttccgcctattctgtacgcaaaagaggccggcatcgaggagatactccagatagc
gtggacggttttggtaatgtaaaactttatgttgtaccggtttccagaacagcaacggaa
ggagatatccgacctgtctttgaagaacatggaaatgtagttgaagttgttatattgaaa
gataagagaactggccaacaacaaggaagttgttttgtgaaatatgcaacggtagatgaa
gctgaaagagctattagatctttaaacaatcaatacacttttcctggggaacatgctccc
ctcacagtcaaatatgcagatagggaacgggagcgtcttggcgtggtggacaaattgtat
gttggttgcctgaacaaagatgcttcaaaaatggaagttgaggagatattttccgcctat
ggtcccattgaagatgtctatattgtacgcgatgagctgaagcaaagtcgtggatgcgga
tttgttaaattttcccattgggaaatggcactggcggcaatcaaagcattaaatggaacg
ttcaagatgaggggttgtgaccagccattaattgttcgttttgcggatcctaagaaacct
aagattggagaaccaaggggtaatcatatatttgcaaatacaaattttgctccttgttca
caagaaccatttgctaggaacatggtagcacccagtcttggcaaatctatgggagggtgt
attttgcctaatgcttcatatcctctgcgaccaaattcttcaagttcattacctcaatca
gtttctcagatggaaaagcaagaacctttcatgcaacaatcatttcctcccctacagcag
ctgccttcacagttggctcagatgccattacaacagacacgaactccacagacaagctcg
caatcatctcaactagaaggctctgaagtgcagaggcagtctcatcaaactggaaaagtg
gagcagcagccgagttcacagtctccaacagttgctagtagttctacctcacctgctgta
cctttaagtccttatataactacttctttagagtgtgattggagcgaacatacctgtcct
gatggacacaagtattattataattgtgtcactcgtgagagtagatggatgaagcctcag
gaatattccttacatgagcatcaattactgaagcatcaaaacctgcaaaatccaagccat
cagcttcagccctctttgccttcaagccaacaagtaattcagatagaacaggaattggat
catgtgcaactgcagtcagaatctagtcctgttattggcccaacttgtgcttaa
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integrated database retrieval system
