Quercus lobata (valley oak): 115971429
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Entry
115971429 CDS
T07350
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115971429
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
qlo01009
]
115971429
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115971429
03036 Chromosome and associated proteins [BR:
qlo03036
]
115971429
Protein phosphatases and associated proteins [BR:
qlo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
115971429
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
115971429
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
115971429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Nup153
DUF5954
Motif
Other DBs
NCBI-GeneID:
115971429
NCBI-ProteinID:
XP_030947207
UniProt:
A0A7N2N4Q3
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All DBs
Position
12:31350527..31354575
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AA seq
512 aa
AA seq
DB search
MLKQIWSKLPRKSSKSSNDSSAESTRYSNSPRASSQSQSNGGGGGGGKRTAVFPASVVAG
IEPLVPFKDVPNSEKMNLFVSKVSLCCVTFDFTDSSKNSVEKDVKRRTLIELVDFVASAS
GSSGSCSIRFTEPAILALCRMCAANLFRVFPPSYRSNCSGGGGDGGGDSDNNECDGDPMF
DPAWPHLNLVYDLLLKFITSSCVDAKVAKKYIDHSFILRLLDLFDSEDPRERDCLKTILH
RAYGKFMVHRPFIRKSINNIFYRFVSESERHNGIAELLEVYGSVISGFALPLKEEHKIFL
WRVLVPLHKPKSVGVYFHQLSYCVTQFIEKEPKLTSTVIRGLLKFWPVTNSQKEMMFLGE
IEEILDAINMVEFQKIMVPLFLRIGCCINSFHFQVAERALFFWNNDNIVNLIAHNRQVIL
PIVFPAFERNAQSHWNPAVLNLSLNVRKMFMEMDEVLFQSCHARFEEEEAKLSLAAEKRK
EAWERLENAASLQPITGNTAVLVTPLATSITC
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcaaatatggagcaaactgcctcggaagtcatcgaaatcgagcaacgactcg
tcggccgagtcaactcgctactccaactcgccgcgcgcatcatcgcaatcgcaatccaac
ggcggaggaggaggaggaggaaagcgcacggcggtgtttccggcgagcgtggtggccgga
atcgagccgttggttccgttcaaggacgtaccgaactccgagaagatgaacctgttcgtt
agcaaagtgagtctctgctgcgtcaccttcgatttcaccgactcgtcgaagaactcggtc
gaaaaggacgtcaaaaggcgaaccctaatcgagctcgtcgacttcgtagcctcggcttcg
ggctcgtccggttcatgttctatccgattcaccgaaccggcaatcctcgctctgtgtaga
atgtgcgcagcgaatcttttccgagtttttccgccgagttaccggtcgaattgtagcggc
ggcggtggcgacggcggaggcgattccgacaacaacgagtgcgacggcgatccgatgttc
gacccggcgtggccgcatttgaatttggtatatgatttacttctcaagttcattacttca
tcttgcgtggacgctaaggtagccaagaagtacatagatcattcctttatattaaggttg
cttgatttgtttgattccgaggatcctagagaacgagattgtctgaaaactattttacat
agggcatatgggaaatttatggttcataggccatttattcgtaagtcaattaataatata
ttctataggtttgtgtctgaatccgaaagacacaatgggattgcggagttattggaggtg
tatgggagtgtaattagtgggtttgcattgcctttgaaagaggagcataagattttcttg
tggagggttttggtacctttgcataagcctaagtctgttggggtttactttcatcaattg
tcgtattgtgttactcagtttatagagaaagagccaaaattgactagtacggtcatccgg
gggttgttgaaattctggcctgttactaatagtcagaaggagatgatgtttttgggcgag
attgaagagattttggatgccattaacatggtggagttccaaaagattatggtgccattg
tttttgcggattggatgttgtattaacagcttccactttcaggttgctgaaagggccctt
ttcttttggaacaatgacaacattgtcaacttgatagcacataaccgtcaggtgattctt
cccatcgtatttccagcattcgagagaaatgcccagagccactggaacccagcagtgctc
aacttaagtttaaatgttagaaagatgttcatggagatggatgaggttcttttccagtcc
tgtcatgctcgctttgaagaagaggaagcaaagctaagcttggcagctgagaagcggaag
gaagcatgggaacgattagagaatgcagccagtctccagccaataactggaaatactgct
gttctggtaactcctctagcaacctcaatcacctgctaa
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