Quercus lobata (valley oak): 115971441
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Entry
115971441 CDS
T07350
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03015
mRNA surveillance pathway
qlo04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115971441
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
115971441
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
qlo01009
]
115971441
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115971441
03036 Chromosome and associated proteins [BR:
qlo03036
]
115971441
Protein phosphatases and associated proteins [BR:
qlo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
115971441
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
115971441
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
115971441
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_NOL10_N
Beta-prop_WDR90_POC16_2nd
ComGF
Motif
Other DBs
NCBI-GeneID:
115971441
NCBI-ProteinID:
XP_030947228
UniProt:
A0A7N2KR65
LinkDB
All DBs
Position
2:1418838..1427759
Genome browser
AA seq
516 aa
AA seq
DB search
MIGGGEEATTPAAEGSQPLDWKFAQVFGERTAGEEVQEVDIISAIEFDRTGDHLATGDRG
GRVVLFERTDTRDHGGQRRELERMDYSNGRHPEFRYKTEFQSHEPEFDYLKSLEIEEKIN
KIRWCQAANGALFLLSTNDKTIKFWKVQEKKVKKVCDLNMDLSRAMGNGPVVSSSISASS
KSCMANGGCDERSSGYSSIDTSLPSGGLSSLRLPMVVTSHETSLVARCRRIYAHAHDYHI
NSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCN
TLAYSSSRGSVRLIDMRQSALCDTHSKLFEEPEVPGTRSFFTEIIASISDIKFAKDGRHI
LSRDYMTLKLWDINMDRGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGQRVATG
SYSNLFRVFGCSEGSTEATTLEASKNPMRRQVQTPTRPSKSLSTLPRVLRRGADTSGVDA
NGNAFDFTTKLLHLAWHPTENSIACAASNSLYMYYA
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgatcggcggaggagaggaagcgacgactccggcggcggaggggtcacagccgctggac
tggaaattcgctcaggttttcggcgaacgaaccgccggtgaagaagttcaggaagttgat
atcatttctgctattgaatttgatagaactggggaccacttagccacaggagatcgtggg
ggtcgggtggttttatttgaaagaactgatacaagggatcatggtggacaacggagagaa
ctagagaggatggattattcaaatgggagacatcctgagttccgctataaaactgagttc
cagagccatgaacctgagtttgactatcttaagagcttggaaattgaggagaaaatcaac
aagattagatggtgccaggcagctaatggtgccctgtttcttctatccactaatgataaa
acaataaaattttggaaggtccaagagaagaaggtcaagaaagtgtgtgacttgaatatg
gatctttcaagagccatgggaaacggtccagttgtttcttcaagtatatcagcaagctcc
aaatcatgtatggcgaatggaggatgtgatgagagatcctctggttattcaagcattgat
acttcactcccatctgggggtctatcatccttacggctacccatggtagtgaccagtcat
gagacaagccttgtggctagatgtcgaagaatctatgctcatgcacatgactatcatatt
aattctatttcaaacaacagtgatggtgaaacttttatctctgcggatgatctgcgaata
aatctttggaacttagaaattagcaaccaaagtttcaatatcgttgacgtcaagcctgca
aacatggaggatcttactgaggtgataacatcagcggagtttcatcctactcactgtaat
acgttagcatacagtagctcaaggggctcagtccgtctcattgatatgcggcagtcagcg
ttatgtgatactcatagcaaattgtttgaggaaccggaagtgcctggtacaaggtctttt
ttcaccgagataattgcctcaatttcagatattaagtttgctaaagatgggagacatata
cttagtcgtgactacatgacccttaagctgtgggacataaatatggatcgtggcccagtt
gcaacttttcaggttcatgaatatttaagacctaagctgtgtgatttatatgaaaatgat
tctatcttcgacaaatttgagtgctgtctaagtggagatggacaacgcgtggcaacaggt
tcctacagcaatctgttccgtgtgtttggttgttctgaaggcagcacagaagcaacaaca
ttggaagccagcaaaaaccctatgaggagacaagtccaaacaccaacaaggccttcaaaa
tctctaagcactcttcctcgtgtgcttagacgaggagctgatacatccggagttgatgct
aatggaaatgcttttgatttcaccacaaagttgctacacctagcatggcatccaactgag
aactcaattgcctgtgctgcttcaaatagcctttacatgtattatgcgtag
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