Quercus lobata (valley oak): 115971467
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Entry
115971467 CDS
T07350
Name
(RefSeq) tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4
KO
K15443
tRNA (guanine-N(7)-)-methyltransferase subunit TRM82
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
qlo03016
]
115971467
Transfer RNA biogenesis [BR:
qlo03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
115971467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
EIF3I
WDR55
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_WDR75_2nd
WD40_RFWD3
Beta-prop_HPS5
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
115971467
NCBI-ProteinID:
XP_030947262
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Position
12:21020655..21026451
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AA seq
429 aa
AA seq
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MEETLIEEGETNKDIEVAPALLAVHPTQKSVAVAVGSDLRVFDFQGVSAVSLVDDTSGPF
HKDSIRAIRYSADGYLFVSAGDDKVVKIWSTESWCCICTVPSEKRVSAVALSNDSLYVCF
ADKFGVVWVVDLDGFDGNQMLVNKKAAPLLAHYCSIITSLEFSPDGRFVISADRDFKIRV
TVFPKKPLDGAHEIQSFCLGHTEFVSCLDFVFTSDYPQGFLVSGSGDSTVRLWDISSGSL
LDTCEVGAKAELLESNGKEEECNLAVTDLCTFRDGTLIAVATQSLQGIVLLSCDLSTRTL
SITRLVSIMGEAFIPTSLGMSSSAGLLWMVTGVSNLHGFDNPPLARVRIISGFEKSSPGD
PTILEDNEILGGDRLLEKLQGSVSVEGKVFLAAAEAVKTAMSNLLVKKQYSTEKREFRKR
ARNDRKIKQ
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaactctgatcgaagagggagagaccaacaaagatatagaggtcgctccggct
cttttagcggttcacccgacccagaaatccgttgccgtcgctgtcgggtcggaccttcgc
gtcttcgatttccaaggggttagtgcagtttctttggtggatgataccagcgggcccttt
cataaggattccataagagctattcgttatagtgccgatggttatctctttgtatctgca
ggggatgataaagttgtgaagatatggtccacggagtcttggtgctgcatttgtactgtg
ccctctgagaaaagagtgagtgcagttgccctgagcaatgacagtttgtatgtatgcttt
gctgacaaatttggcgttgtttgggttgtggacctagatggctttgatggcaatcaaatg
ttagtcaataagaaggcagcaccattgcttgctcactactgtagcattatcactagcctg
gaattttcaccagatgggaggtttgttattagtgctgatcgggatttcaaaattcgtgtt
actgtgtttccaaagaaacctttagatggagctcatgagatacaaagtttttgccttggt
catactgaatttgtatcctgccttgattttgttttcacttcagattacccccagggtttt
cttgtctctggaagtggtgattcaacagttcgcttgtgggatatatcctctggatctctc
cttgatacctgtgaagttggagcaaaggcagagcttttagagtctaatggaaaagaagag
gagtgcaatctggctgttaccgatctatgcaccttccgagatggtacactgattgcagtg
gccactcaaagcttgcaaggaatagtattgttgagctgtgacctctccactcgaactctt
tcaataacaaggttagtttcaataatgggtgaggccttcattccaacaagcctagggatg
agctcttctgccggattattgtggatggtgacaggtgtctctaacttgcatggtttcgat
aaccctcctttggcccgtgtgaggatcatctcaggttttgagaaaagtagtcctggtgat
ccaaccatcttggaagataatgagattcttggcggagatagactgcttgagaagttgcaa
ggaagtgtgtcagtggagggaaaagttttcctggcagctgctgaggctgtgaaaacagca
atgagcaatttgttagttaaaaagcagtactctacagagaaacgagaatttagaaagagg
gcaagaaatgatagaaaaattaaacagtga
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