Quercus lobata (valley oak): 115971475
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Entry
115971475 CDS
T07350
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115971475
03041 Spliceosome [BR:
qlo03041
]
115971475
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
115971475
Spliceosome [BR:
qlo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
115971475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
115971475
NCBI-ProteinID:
XP_030947283
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All DBs
Position
2:1438122..1446541
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AA seq
710 aa
AA seq
DB search
MSDEAQYSSGADTNKRKYDDQTAPPPSTRRPTGFSAPIAPHSPDSAPPSYNAVAPPIEGL
IKAKQRAQEVAARLLISSAGAAAAAVGGGLDAKRPKFENGASGFDSHDSGFSSIPPDVKP
HTMSSAPLPPVSYGYQNASSSKKIDIPNGRVGVIIGKGGETIKYLQIQSGAKIQVTRDMD
ADPNSPTRMVELMGTPEQIAKAEQLITDVLSEVLVNAPLAEAGGSGVVSRRLTGQSGADK
FVMKIPNNKVGLVIGKGGETIKNMQANTGARIQVIPLHLPPGDTSIERTLQIDGTSEQIE
TAKQLVNEVISENRVRNPSMAGGYPQQGYQARPPTGWGTPGAPPVQQTGYGYVQPGAYPG
PSPQYNMSQPPYSGYPPQPASGGYASNWDQSAVPPSQQTSQGGGNDYYSQQPPSQQQQTP
GGPAAPADNSGYYYGQQQPSSYNQQGQGYTQDGYGGYQAQPQSAYGQPPSYDQQQGYASA
PTYGNVTNPTQDGHTPSYGSQGDSTQAPPVQPSSVGQQGYTSGQQPSLSPASYPTQGTTQ
PGYGIPPTSQAGYGNQPPAQPGYGPGYGAPQAQKPLANPPVYGQPTQSPGGTPGGYGQPA
PVQPGYPHSQPPAASYAQPDSGSQRAPPSNYGAAAGQPGYAAPPYGAPPVSQPGYGQAPL
PYNAYGAAYSQPPVYSADGSAGGNTRGTYDAAPASQTAQQSGVAKTSPQS
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgaagctcaatactcctccggcgctgacaccaacaaacgcaaatacgatgac
cagacggcgccgcctccgtccactcgaaggcccaccggtttctccgctccgatcgcgcct
cactctccggactcggctcctccttcctacaacgccgtcgctcctcccatcgaaggccta
atcaaagccaagcagcgcgcccaggaggtcgcagctcgcctcttaatcagctccgccgga
gctgccgccgccgcagtcggcggaggacttgacgccaaacgccctaagttcgagaacggc
gcttccggattcgattctcacgactctggcttcagctccattccccctgatgtgaagcca
cacacaatgagctcggctcctttgccgccagtttcatatgggtaccagaatgcaagctca
agtaagaagatcgatattccgaatggtagagttggtgttattattgggaaaggtggggag
accatcaaatatcttcaaattcagtctggagctaagattcaggtcactcgggatatggat
gcggaccccaattctcctactaggatggtggagctcatgggtaccccggaacagattgcc
aaggctgagcagttgataactgacgttctttctgaggtgctagttaatgctcctctggct
gaggcagggggctctggcgtggtttctcgaaggctgactggacagtctggggctgataag
tttgtaatgaaaatcccaaataacaaggttggtctagtaattggcaaaggaggagaaaca
attaaaaatatgcaagctaatactggagctcgtattcaggtgataccattgcatctgccc
cctggtgatacatcgattgaaaggacattacagattgatgggaccagtgagcaaattgag
actgctaaacaattggtcaatgaagtcatcagtgagaatcgtgttagaaatccttcaatg
gctggagggtaccctcagcaaggttaccaagcacgacctcctacaggctggggcacacct
ggggctccccccgttcaacaaacaggttatggctatgtacagcctggagcatatccaggt
ccatctccccagtataacatgtctcagcctccttattcaggctatcctcctcaacctgcg
tctggtggatatgcctccaattgggaccagtcagctgtcccaccatctcaacagacttct
cagggaggtggtaatgattattacagtcagcagccaccttcacagcaacagcaaacccct
ggtggtcctgcagctccagcagataactctggttattattatggtcaacaacaaccttca
agctataatcaacagggacagggttatactcaagatggctatggagggtatcaggcacag
cctcaatctgcatatggccaaccaccatcatatgatcagcagcaagggtatgcttctgct
cctacctatgggaatgtgactaatccaacacaagatgggcacactccctcctatggttcc
cagggggattcgacccaggctccacctgtccagccttcttctgtgggccagcaaggatac
actagtggtcaacagcctagcctcagtcctgcaagttatccaactcaaggaacaacacaa
ccaggttatggtattcccccaacttcccaagctggctatggaaatcaaccaccagctcag
cctggatatggacctggctatggagcacctcaagctcagaaacctcttgcgaatcccccg
gtttatgggcagcctacgcagtcacctggtggcacccctggaggttatggccagcctgcc
cctgtgcagccaggatatccccattctcagccgccagctgctagttatgctcagccagat
tctggttcgcaacgtgccccaccatccaattatggtgctgcagctggtcagccaggttat
gcagctccaccttatggtgcaccacctgttagccagccaggttatggacaggcaccactt
ccatacaatgcttatggtgctgcttactcacagcctccggtttattctgctgatggtagt
gctggtgggaacacccgtgggacctatgacgcagcacctgcttctcagactgctcagcag
agtggagttgccaaaacatcaccccagagttaa
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