Quercus lobata (valley oak): 115971492
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Entry
115971492 CDS
T07350
Name
(RefSeq) oligouridylate-binding protein 1B-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115971492
03041 Spliceosome [BR:
qlo03041
]
115971492
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
115971492
Spliceosome [BR:
qlo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
115971492
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_5
RRM_8
RRM_Nup35
RRM_DEAH11
Motif
Other DBs
NCBI-GeneID:
115971492
NCBI-ProteinID:
XP_030947306
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All DBs
Position
12:25662275..25675353
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AA seq
435 aa
AA seq
DB search
MQQRLKLQQQQQEALMQQALLQQPHMYHPGVLAAAMSQMEPIPSGNLPPGFDSTTCRSVY
VGNIHVNVTEKLLGEVFQTAGPLAGCKLIRKDKSSYGFVDYHDRTSAALAIMNLHGRQLY
GQALKVNWAYTNNQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDHKTG
RSKGYGFVAFRNQQDAQSAINDLTGKWLGNRQIRCNWATKGSTSSEDRQINENQNAVVLT
NGSSDGSQENINEEAPENNPAYTTVYVGNLSHEVTQAELHCQFHALGAGVIEEVRVQRDK
GFGFVRYNTHEEAASAIQMANGRIIRGKPLKCSWGSKPTPPGTASNPLPLPTQPYQILPT
ASMNQGYSPAELLAYQRQLALSQAAASGLSGQALVQMTGQHGLAAGSMGLSSGGSQTIYD
GYPNNSSGQQLMYYR
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaaaggttgaaacttcagcaacaacaacaagaagccctaatgcaacaagccctt
cttcaacagcctcacatgtaccaccctggtgtcctcgctgctgccatgtctcagatggag
cctatcccaagtgggaatctgcctcctggctttgactcgactacatgccgcagtgtctat
gtaggaaatattcatgtaaatgtcaccgagaagcttcttggtgaagttttccagactgct
gggcctcttgctggatgcaagctcatcagaaaggataagtcatcatatggtttcgtggac
taccatgaccggacatctgcagcccttgcaataatgaatttgcatgggcgccaactttat
ggtcaggcacttaaggtgaattgggcatataccaataaccagagggaggatacttcagga
cacttcaatatatttgttggtgatttgagtccagaggttactgatgcaacattatttgcg
tgcttctcagtatatcctagttgttctgatgcaagggtcatgtgggatcacaaaactggc
cgctcaaaaggatatggatttgttgctttccgtaatcagcaggatgcacagagtgccatc
aatgacttgactggtaaatggcttggaaataggcaaataagatgcaactgggcgaccaaa
ggttctacttctagtgaagacaggcaaatcaatgagaatcaaaatgcagttgtacttaca
aatgggtcttcagatggaagccaggagaatatcaatgaggaggctcctgaaaacaatcca
gcatacactactgtctatgttggcaacctttcccatgaggtaactcaagctgaactccat
tgtcagtttcatgctcttggagctggggttatagaggaggtgcgtgtccagagggataaa
ggatttggatttgttagatacaacactcatgaagaagcagcctcggccattcaaatggct
aatgggaggataattcgtggcaaacccttaaagtgctcgtggggtagcaagccaactcct
cctgggacagcttcaaatccattacctcttccaactcaaccatatcagatacttccaact
gctagtatgaaccaaggctattctccagctgagttgttggcttatcagcgccaacttgct
ttaagtcaggctgctgcatctggcctctcaggtcaagctctcgtgcagatgactggacag
catgggctggctgcaggatccatgggattgagctctgggggatcccaaacaatttatgat
ggatatcctaacaattcgtccggccaacagctcatgtactatcgttag
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