Quercus lobata (valley oak): 115971497
Help
Entry
115971497 CDS
T07350
Name
(RefSeq) uncharacterized protein LOC115971497 isoform X1
KO
K19027
zinc finger FYVE domain-containing protein 26
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qlo03400
]
115971497
DNA repair and recombination proteins [BR:
qlo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
115971497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_ZFYVE26
TPR_2
Motif
Other DBs
NCBI-GeneID:
115971497
NCBI-ProteinID:
XP_030947313
LinkDB
All DBs
Position
12:30947374..30991069
Genome browser
AA seq
2531 aa
AA seq
DB search
MDKEIEILTRLVANHLHLAQFEPLRAVILALRSRNPDLALAVLQTIVARSGRFQNILWSD
SCPSPPLLTYMSTLELLQQFDDNSNASSAWSFDPETLRLRAEFLLLVQHLIDRVSESMRN
NFDIQSLEKEVLNGSEGYDERAEVLEREKCEELRDVNGGFDECVRVLDRVLELGVKRLKP
DADVDVDGNGNDIDMSSVEESELVCLKRVILDYADVFDALCWNIQRQVRGWEGFDSGLAE
TARSEEEGEALRVLGLIQRSVQLAHLDAIKECLKEGNVDGAVPRIRFLHTDYGVEEDEYR
MVLQDLIRSVSSRKGIFGDSWQAMREKFLGIYGEALSSNCRDLVQMIQVIQDEFLSEEIE
TYKALDDSQIPPPLECFQRYLAELKSDTNIHEKTSSLNVAVSSCMRDMYHYARVSNLHVL
ECVMDSALSAVKREQLQEASNVLMLFPRLQPLVASMGWDLLSGKTTARRSLMQQLWTSKS
QVLRLEESSLYGNQSDEISCVEHLCDNLCYQLDVASFVACVNSGRSWNSKFSLLLSGKEQ
IALAEEVAQSDFFVENFVLERLSVQSPLRVLFDVVPGIKFQEAIELISMQPIASPTDAWK
RKQDVELMHMRYALESVVLALAAMERCTGDERESHHQLALCHLKDLQNHLEAINNIARKI
LMVNVIISLLHMDDLSLNLTHCVSPERDSKSCYTHAWENNDLTPCDGGNKMVISFMGILL
DILNRNLPSAVIELEQALSEDVIMGGRQALEWRVSIAKRFIEEWEWRLSTLQRLLPLSER
QWRWKEALTVLRAAPSKLLNLCMQRAKYDIGEEAVHRFSLSAEDKATLEVVEWVDSAFIR
ASVEDVVSRAAGGTSAVQDLDFASLRSQLGPLAAILLCIDIATTSARSAKMSQQLLNKAQ
VMLSEIYPGGAPKMGSTYWDQILEVGVITVSRRVLKRLHEFLEQDSLPVLQALLSGEMIF
SLSKESHRQGQRERALAMLHQMIEDAHRGKRQFLSGKLHNLARAVADEETEPNFSRGEAP
SSDRKVLSNTDKDIVLGLGLRAVRQIPLSSMAGETGAQPVSYDLKDTGKRLYGLSTKATT
YLSQFILHIAAIGDIVDGTDTTHDFNFFSLVFEWPKDLLTRLVFDRGSTDAAGKVAEIMG
ADFVHEVISACVPPVYPPRSGHGWACIPVIPTCPKSGSENKLLSPSSKEAKPNCYRRSSA
TPGIPLYPLQLDIVKHLVKMSPVRAVLACVFGSSILYSGSDSSISGSLNDGLVQAPDADR
LFYEFALDQSERFPTLNRWIQMQTNLHRVSEFAVATKQTSDHTKRKPEATSAIKRLREHD
NDTESEIDDIVCSTNVSTALQDFNGQGDAAPDPWRDSSKSEFAELDNTVFLSFDWENEEP
YEKAVERLIDEGKLMDALALSDRFLRNGASDRLLQLLIERGEENHSIPGQPQGYGGHNIW
SNSWQYCLRLKDKQLAARLALKYMHRWELDAALDVLTMCSCHLPESDPLRNEVLHMKQAL
QRFSHILSADDHHSSWQEVEAECKEDPEGLALRLAGKGAVSAALEVAESAGLSIDLRREL
KGRQLVKLLTADPLNGGGPAEASRFLSSLRDSDDALPVAMGAMQLLPNLRSKQLLVHFFL
KRREGNLSDVEISRLNSWALGLRVLAALPLPWQQRCSSLHEHPHLILEVLLMRKQLQSAA
LILKEFPVLRDNNIIIAYAAKAMAVSISSPHREHRISVSGARPRQKTKAGIPPRPSFTSS
LNNLQKEARRAFSWAPRNTGDKAAPKDAYRKRKSSGLTSSEKVAWEAMTGIQEDRVSSYP
ADGQERLPSVSIAEEWMLTGDASKDESVRASHKYESAPDITLFKALLCLCSDESVSAKSA
LDLCINQMKNVLSSQQLPENASMETIGRAYHATETIVQGLLYCKSVLRKLTGGSEISTHS
DRSRDADDASSDAGSSSVGSQFTDELSEVLSQVEIWLGRAELLQSLLGSGIAVSLDDIAD
KESSEHLRDRLSVEERYSMAVYTCKKCKIDVFPVWNAWGHALIRMEHYAQARVKFKQALQ
LYKSDAAPVILEIINTIEGGPPVDVSAVRSMYEHLAKSAPTILDDSLSADSYLNVLYMPS
TFPRSERSRRAQESENNNSSLSSEFEDGPRSNLDSIRYVECVNYLQDYARQHLLSFMFRH
GHYNDACVLFFPPNAVPSPPQPSILGGVATSSSSPQRPDPLATDYGTIDDLCDLCIGYGA
MSVLEEVISTRMSSANPQDVAVNQYTAAALVRICIYCETHKHFNYLYKFQVIKNDHVAAG
LCCIQLFMNSSAQEEAIKHLEHAKMHFDEGLSARHRGGDSTKLVTKGIRGKSASEKLTEE
GLVKFSARVSIQVEVVRSFNDSDGPQWKYSLFGNPNDLETFRRRCKIAETLVERNFDLAF
QVIYEFSLPAVDIYAGVAASLAERKKGSQLTEFFRNIKGTIDDDDWDQVLGAAINVYANK
HKERPDRLIDMLTSSHRKVLACVVCGRLKSAFQIASRSGSVADVQYVAHQALHANALPVL
DMCKQWLAQYM
NT seq
7596 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagagatcgagatcctcactcgcctcgtcgcgaaccacctccacctagctcag
ttcgagccactccgagcagttatcctcgctctccgatcccggaacccggacctcgctctc
gccgtcctccaaacaatcgtggctcgatcgggccgtttccagaacattctatggtcagac
tcgtgtccatctccgcctctcctcacctacatgtccactctcgaactcttgcagcaattc
gacgacaacagcaatgcctcgtcggcgtggagcttcgatcccgaaacgctccggctacgc
gccgagttcttgttactagttcagcacctgatcgaccgggtttcggagagcatgcggaac
aatttcgatatccaaagcttggagaaagaggtgttgaacgggagcgagggttacgacgag
cgagcggaggttttggagagggaaaagtgcgaggaattgagagatgtgaatggcggattc
gatgagtgtgtgagggttttggatagggttttagaattgggggttaagaggttgaagcca
gatgctgatgttgatgttgatggtaatggcaatgatattgatatgagttcagttgaggaa
agcgaattggtgtgtttgaagagagtgatattggattacgcggatgttttcgatgcattg
tgttggaatatacagcggcaagttaggggttgggaaggttttgattctggtttagctgaa
acagcgcggtctgaggaggagggggaggctctgagggttttggggttgattcaaaggagt
gttcaattagctcacttggatgctattaaggaatgcttgaaggagggtaatgtagatgga
gcggttcctcgaattcgttttcttcacactgattatggtgtggaagaggatgagtatcgc
atggttttgcaagatctaatcagaagtgtttcatcaagaaagggtatttttggagactca
tggcaagccatgcgagaaaaatttctagggatctatggagaagctctctcatcaaattgc
agagatcttgttcaaatgattcaggtgattcaagatgagtttctttctgaagagattgag
acgtataaagctcttgatgacagccagattccacctcctcttgagtgctttcaaagatat
cttgcagagttgaaatctgatacaaatatacatgagaagacttcatcgttgaatgtggca
gtcagttcttgcatgagagatatgtaccattacgctcgtgtttctaatttacatgtactt
gaatgtgtcatggatagtgccctatctgctgtgaagagggagcagcttcaagaagctagc
aatgttcttatgttatttcctcgacttcagcccttggtggcttccatgggttgggattta
ttgtccggtaaaacaacagcacggaggagtttaatgcaacagctgtggacaagtaagtct
caggtacttcggctggaagaatcttcactctatggtaatcaatcagatgagatatcttgt
gtggaacatctttgtgataatttgtgttatcagcttgatgttgcctcttttgttgcctgt
gtcaattctggtcgatcatggaattcaaaattctcattgttgttatcgggaaaagaacaa
atagcattagcagaggaagttgcccagtcagacttttttgttgagaactttgtgttggaa
agactctctgtacaaagtccgcttcgggtattgtttgatgttgttccgggcataaaattc
caggaagctattgaattgatcagcatgcaaccaattgcttctcccacagatgcttggaag
agaaagcaagatgttgaactcatgcacatgcgttatgctctggaatcagttgttcttgca
ttagcagcaatggaaaggtgtacgggtgatgaaagagaaagtcatcatcagttggcatta
tgtcatttgaaagacctgcagaaccatttggaagctattaataatattgcacgcaagata
ttgatggtgaatgtcataatttctcttttacatatggatgatctttctctgaatttgacg
cattgtgtctccccagagagagattctaaatcatgctacacccatgcttgggaaaataat
gatctcactccatgtgatggagggaacaaaatggttatatctttcatggggattctactt
gatatattaaatcgcaatcttccgtcagctgtgattgaactagagcaagcattgagtgag
gacgtaataatgggtggaagacaggccttagagtggagagtctcaattgctaaacgtttc
attgaagagtgggaatggcggttgtcaactttgcagcgccttttaccgttatccgaacgc
cagtggagatggaaggaagcattgactgtattacgtgcagccccctcaaagctactcaac
ctttgcatgcaaagagcaaagtatgacattggagaagaggcggttcatcgattttcatta
tctgctgaagataaagcaacccttgaagtagttgaatgggtagatagcgccttcataaga
gcttctgtagaagatgtagtgtctcgtgctgctggtgggacttctgcagtacaagatcta
gattttgcctctttacgctcccaattaggtcctttggctgcaattcttctttgtatagac
attgccactacttctgcaaggtctgcaaagatgtcccaacagcttttgaataaggcgcaa
gttatgttgtcagagatatatccaggaggtgctccaaagatgggctccacttactgggat
caaatccttgaagttggagtgattactgtttcacggcgtgtcctcaagcgtttacacgag
ttcttggaacaggatagccttcctgtccttcaggcccttttgtctggggaaatgatcttt
tctttgtctaaggagtcccaccgacagggacaaagggaacgtgctcttgcaatgctacat
cagatgattgaagatgctcacaggggcaagcggcagtttttaagtggtaagcttcataat
cttgcaagagcagttgctgatgaagaaacagagcctaatttttcgagaggggaagcccca
tcatctgatcgaaaggttctctccaatactgacaaggatattgttcttgggcttgggtta
agagctgtgagacagatacccttaagctcaatggctggggaaactggtgcacaacctgtt
agttatgatctaaaagatactgggaagaggttgtatggtttaagtaccaaggccacaacg
tatctatcacaatttattctccatattgctgcaattggtgacatagttgacgggactgat
acaactcatgatttcaattttttttcccttgtgttcgaatggcctaaggatcttttaact
cgtctggtctttgaccgaggcagcactgatgccgctggaaaggttgctgaaattatgggt
gctgattttgtgcatgaagtgatttctgcatgtgtacctccagtttatcctccgcggtct
ggccatggatgggcgtgcattcctgtcattcctacctgccccaagagtggctctgaaaat
aaactactctccccttcttctaaagaagctaaacctaattgttaccgtcgttcctcagcg
acccccggaatccctctataccccctccaattggatatagtaaaacatcttgttaaaatg
tctccagtgagggctgtcttagcatgtgtttttgggagcagtatattgtactctggcagt
gattcttctatatcaggctccttaaatgatggattagttcaggcacctgatgctgacagg
ttgttttatgagtttgcgcttgatcaatctgagaggttcccaactttaaatcgatggata
caaatgcaaactaaccttcatcgagtctcagaatttgctgtagcaaccaagcaaacatct
gatcataccaagcgtaaacctgaagcaacatctgctattaagagactccgtgagcatgac
aatgatactgagtcagaaatcgatgacattgtttgcagcactaatgtttcaactgctttg
caagacttcaatggtcaaggggatgcagctcccgatccttggcgtgattcttcaaaatct
gagtttgctgaacttgataatacagttttcctttcttttgattgggagaatgaagaaccc
tatgagaaagctgttgaacggttgattgatgaaggaaaactaatggatgctcttgcactt
tcggatcgctttctacgtaatggagcctcagaccgtttacttcagctactcattgaacgt
ggggaagagaatcattcaatccctggacagcctcaaggatatggcggccacaacatctgg
agcaatagttggcagtattgcctgcggttgaaggacaaacaactggctgctagacttgcc
ctcaagtatatgcacagatgggagcttgatgctgctttggatgttttgactatgtgcagc
tgccacctgccagaaagcgatccacttaggaatgaggtcttgcatatgaaacaagcttta
cagaggttcagccacatattaagtgcagatgatcatcatagcagctggcaagaggttgaa
gcagaatgtaaggaagatcctgagggcttggcacttagactagctggaaagggagctgtt
tctgctgctttagaagtggctgaaagtgctggattatctatagacttgcggagagaactg
aagggccggcaacttgtgaagcttctcactgcagaccctctaaatggtggaggtccagca
gaagcttctcggtttctttcttcactacgtgactctgatgatgctctaccagttgccatg
ggtgcaatgcagttgctacccaatttacggtcaaagcaacttcttgttcacttttttttg
aagcgaagagaaggaaatctctcagatgttgagatttcgcggcttaactcatgggccttg
ggtcttcgtgttttggctgccttgcctttgccgtggcagcaaagatgttcttcattgcat
gagcaccctcatttgatactggaggtgcttctgatgagaaaacaactgcaatctgctgct
ctgatcctaaaggaatttcctgtgttgagagacaacaatataattattgcatatgctgca
aaggctatggctgtcagtattagctctccccatagagaacatcgcatatctgtttctgga
gcaagaccaaggcagaaaacaaaggcaggcattcctccgaggccatcttttactagcagt
ctaaataacttgcaaaaagaggctcgcagagctttttcttgggctccacgaaatactgga
gacaaggctgctccaaaagatgcttatcgtaaaagaaagagttctggtttgacttcatct
gaaaaagttgcttgggaggctatgactggaattcaagaggatcgtgtttcatcatatcct
gcagatgggcaagaacggcttccttctgtttcaattgctgaggaatggatgctgacaggt
gatgcaagtaaggacgaatctgttcgtgcatctcacaaatatgaaagtgcccccgacatt
accctatttaaggcactgctttgtctttgttctgatgagtcggtgtctgccaaaagtgcc
ctggacttgtgtattaatcagatgaagaatgtgttaagctcccaacagttgcctgagaat
gcgtcaatggaaacaattggtcgtgcatatcatgccacagagacaattgtacaggggcta
ctatattgtaaatctgtgctgagaaagcttacagggggtagtgaaatctccacccattct
gacagaagtagggatgctgatgatgcatcctctgatgctggtagctccagtgtgggcagt
cagttcacagatgaattatctgaagttctctcacaggtggagatctggctaggacgtgct
gaactgcttcaaagccttttgggatcagggattgctgtttctcttgatgatattgctgat
aaggagtcatctgaacatctccgtgaccggttgagtgtagaggagcgatacagcatggct
gtatatacttgcaaaaagtgtaagattgatgttttccctgtgtggaatgcttggggacat
gctttgatacggatggagcactatgctcaagctcgggtgaagtttaagcaagctcttcaa
ttgtataagagtgatgctgcacctgtcattttagagattattaatacaatcgaaggaggt
ccaccagttgatgtttcagcagttcgttccatgtatgagcatttggctaaaagtgcaccg
acgatattggatgattctctttctgctgattcatatctcaatgttctatacatgccatcc
acctttccacgttcagagagatctaggcgggctcaggaatctgaaaataataattcctcc
ctcagttcagaatttgaagatggacctcgcagcaatcttgacagtattcgatatgttgaa
tgtgtgaactatttacaagactatgcacgccagcatttgctgagttttatgtttaggcat
ggtcactacaatgatgcttgcgtgttgttttttcctccaaatgctgttccttcccctcct
caaccatcaatattggggggagtagcaacttcatcttcatcccctcaaaggccagatcca
ttggctacagattatgggacaatagatgatttgtgtgacttgtgtattggttatggtgca
atgtctgttcttgaggaagtgatttcaacaagaatgtcatcagcaaatccacaggatgtg
gcagtaaatcagtatacagcagcagcccttgtccgtatttgcatctattgtgaaacacat
aaacatttcaattatttatacaagtttcaggttattaaaaatgatcatgtcgctgctgga
ctttgctgtattcagttgtttatgaattcttctgcacaagaggaagctatcaaacatttg
gaacatgctaagatgcattttgatgaaggtttgtcagcacgacatagaggtggagattct
actaagcttgtcacaaagggcattagaggaaaaagtgcctctgagaagcttactgaagag
ggacttgtgaagttttctgctcgggtttcaattcaggtggaagttgtgagatcctttaat
gattcagatgggccacagtggaaatattcgctttttgggaatccaaatgatcttgaaaca
ttcaggagaagatgtaaaattgctgagactcttgtggagaggaattttgatttagctttc
caagtgatctatgaattcagtcttcctgctgttgatatatatgctggtgttgccgcatca
cttgctgagaggaaaaaaggcagtcaactgacagaattttttagaaatataaaaggcaca
attgatgatgatgattgggaccaggtcttgggagctgcaataaatgtttatgctaataaa
cacaaagaacgccctgaccgtctcatagacatgttaaccagcagccacaggaaggttttg
gcttgtgtggtttgtggtcgtttaaaaagtgctttccaaattgcttctcgaagtggaagt
gtagctgatgttcaatatgtagcccatcaggcattacatgcgaatgcactccccgtgctt
gatatgtgtaaacaatggttggctcagtacatgtaa
DBGET
integrated database retrieval system
