Quercus lobata (valley oak): 115971538
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Entry
115971538 CDS
T07350
Name
(RefSeq) vacuolar protein sorting-associated protein 9A-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qlo04131
]
115971538
Membrane trafficking [BR:
qlo04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
115971538
Protein recycling
Other Rab GTPase associated proteins
115971538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
Motif
Other DBs
NCBI-GeneID:
115971538
NCBI-ProteinID:
XP_030947381
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Position
12:complement(35353287..35365906)
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AA seq
506 aa
AA seq
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MENSDGFLGLHDFLDRMRQPSAADFVKSIKSFIVSFSNNAPDPERDGASVQEFFAKMEVA
FRAHPLWAGCSEEELESAGEGLEKYVMTKLFTRVFASHPDDVKLDHQLSEKMALIQQFIR
PENLDIKRTFQNETSWLLAQKELQKINMYKAPRDKLVCILNCCKVIGNLLLHASISSEDV
PGADEFLPVLIYVTIKANPPQLHSNLLYIQRYRSQSRLVAEAAYFFTNMLSAESFISNIN
AKALSMDETEFESNMETARALLSGISSDFDGQSDQSDYRFGGDISRAEPMEFKHQSLNVY
KDKDSTIQSKSSESKSRSKEVPFAEDQLTKIPSLSDLENKGATMLLKEDMVRQVFRDYPY
VFASVGDLTVNDVEDLLNNYKQLVFKYVSLAKGLGVTPLASSNSQSQKQQHPEATKEPED
TRAVKPNESPLASSNSESQKQQHPEETKELEDTRAEKPNESNKQARTDGDSDRVTLLEEE
NFESKLPQDEAPQDGVNDGTSQRSFS
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggagaactccgacgggttcttaggtttgcacgattttctggatcgcatgcgacaaccc
tccgccgccgatttcgtcaaatccatcaaaagttttattgtctccttttcaaacaatgct
cctgatccagagagggacggtgcttcagtacaggagttctttgccaagatggaagtagct
ttcagggctcacccactctgggctggttgctcagaggaggagctggagagtgctggtgaa
ggactggagaagtatgtcatgacaaagttatttactcgtgtatttgcttcacatccagat
gatgtaaaacttgatcaccaactttctgagaagatggctttgattcaacaattcattcgg
ccagaaaatttggatattaaacggacctttcagaatgaaacatcatggctacttgcacag
aaagaactgcagaagatcaacatgtacaaggcaccacgagacaagcttgtttgtatcctc
aattgttgcaaggttatcggtaacttgctgcttcatgcttctatttcttcagaagacgtg
cctggagctgatgaatttcttcctgttctgatttatgttactataaaggcaaaccctcca
caactgcactcaaatctgttgtatatacaaagatacaggagtcaatctcgcttagttgca
gaagcagcatatttttttaccaacatgctttctgctgagtccttcatttcaaacattaat
gcaaaggccctttcaatggatgaaaccgagtttgaaagtaacatggaaactgctcgagca
cttctgtctgggatatcgtctgattttgatggtcaatctgatcaaagtgattatagattt
ggaggagacatatctagagcagaaccaatggaattcaaacatcaatctttgaatgtttat
aaggataaggactccacaatacaatccaaatcgtctgaatcaaaatcccgaagtaaggag
gtcccatttgcagaagatcagttaacaaaaattccatccctctcggatttggagaataaa
ggggcaaccatgcttttgaaggaggatatggtaaggcaagtctttcgggattatccatat
gtttttgccagtgttggtgatctaacagtcaacgatgtagaggacctgctaaataattac
aagcaacttgttttcaagtatgttagtcttgccaaagggttgggtgtcactcctcttgct
tcatccaattcacaatctcagaaacaacagcatccagaagccacaaaggaacctgaagat
actagagctgtaaaacccaacgagtcacctcttgcttcatccaactcagaatctcagaaa
caacagcatccagaagaaacaaaagaacttgaagatactagagctgaaaaaccaaatgag
tcaaacaagcaagctaggactgatggtgattcagatagagttacactattggaagaagaa
aattttgaatccaagttgccacaggatgaggctcctcaagatggggtaaatgatgggact
tcacaacgaagtttttcttaa
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