Quercus lobata (valley oak): 115971544
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Entry
115971544 CDS
T07350
Name
(RefSeq) peroxisome biogenesis protein 6-like
KO
K13339
peroxin-6
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
115971544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qlo04131
]
115971544
Membrane trafficking [BR:
qlo04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
115971544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_16
AAA_lid_3
AAA_5
AAA_22
RuvB_N
Rad17
TsaE
nSTAND3
AAA_17
AAA_18
RNA_helicase
AAA_33
NPHP3_N
DUF815
PEX6_4th
AAA_28
AAA_7
AAA_14
Viral_helicase1
Parvo_NS1
TIP49
AAA_25
ATPase
Mg_chelatase
IstB_IS21
AAA_2
PhoH
AAA_24
Vps4_C
MCM
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
115971544
NCBI-ProteinID:
XP_030947390
UniProt:
A0A7N2RET3
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All DBs
Position
12:complement(30665234..30673067)
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AA seq
936 aa
AA seq
DB search
MVERRKPLVLSSTKLLINSVLSSSSSSSPPPPQLADRVEDDVSGGTLQLRAGILRFPRDK
IVISSHHSNLASLDDAALVGLSTCALKRLSITSASLVLVKNIETNVQRIAQVVVLDPPGM
REAAHGIKLSSFGCSHTMCVFPSATFAPEGCLQMGVEVAYLSPILAFNLDLHVSCLNSLV
HGGQETLAAYFQAKVDDETSGEVIEGSMISVGLESLARLPRYASHLRASFVKIPECGTLE
TLKVRSSIEAEDRQDMIDLALQKYFEADRYLARGDIFSICINWNCNSITCIPCNQKSQNR
SDNIIYFKVVALEPSDEKFLRVNSTQTALVLGGSVPSAIPPDLLIAGPKGFPPLQGDTVK
ILASILAPPLCPSALSSKFRVSVLLHGLAGCGKRTVIRYVARRLGLHVVEYSCHNLIAPS
ERKASVALAQAFNTAQRYLPTILLLRHFDVFRNLGSHEGSPNDQVGITSEVASVIRKFSE
PVTEDEDIYSEGEPNDDSNMKDVGKVRRHRVLLVAAADSSEGLPPTIRRCFSHEISMGPL
TEEQRVEMLTQSLQSVSELLSNTGSEDFIKEIVGQTSGFMPRDLCALIADAGANLIPSGN
VLNEKVEPKELDSDSHEVAPQVLGKEGMTKALERSKKRNASALGTPKVPNVKWEDVGGLE
DVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKG
PELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQML
AEIDGLNDSTQDLFIIGASNRPDLIDPALLRPGRFDKLLYIGVNSDASYRERVLKALTRK
FKLHKDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLSSDSDSSSTDDRAESVVV
EYDDFVKVLDELSPSLSMSELKKYDLLRDQFEGASK
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggtggagaggaggaagcctctggttctctcctccaccaagctcctcatcaactccgta
ctcagttcatcgtcgtcgtcgtcgccgcctccgccgcaactcgctgaccgagtcgaagat
gacgtgtccggcggcaccttgcagctacgtgccggaattctccgattcccaagggataaa
atcgtcatttccagtcaccactccaatttggcttctctggacgacgccgctttggttgga
ctctccacctgcgccctcaaacgactctccattacttcagcctcactggttcttgtcaag
aatatcgagacaaatgtgcaaagaatcgcgcaggttgttgttttagaccctccgggcatg
cgcgaagctgcacatgggattaaattatccagttttggttgttcccatacaatgtgtgtt
tttccttcggctacttttgcaccagaaggttgtctacagatgggtgtggaagttgcctat
ttgtctcctattttggcatttaaccttgacttgcatgtatcgtgcttgaattctcttgtc
catggagggcaagaaactttagcggcttatttccaagcaaaagtggatgatgagacgtct
ggggaagtgattgagggttctatgattagtgtagggttggaatcattggctcggttgcca
agatatgcttcacatttgagggcttcttttgtgaagataccagaatgtggtactcttgag
actctcaaagtaaggtcatctattgaggctgaagatcgtcaagatatgattgacttggcg
ctacagaaatactttgaagcagataggtatctagcaagaggtgatattttcagcatttgc
ataaattggaattgcaattcaattacttgcattccttgcaaccaaaagtcacaaaataga
agtgataacatcatctacttcaaggttgtagctctggaaccatcagatgaaaaatttctt
cgagtaaatagcacccagactgcccttgtgcttgggggaagtgttccttctgctattccc
ccagatttgttgattgctggaccaaaaggttttccacctttgcagggggatacagtgaaa
attttggcctccattcttgcaccccctctttgcccgtcagcactttcttcaaaattcaga
gtttctgttttactacatggtttggcaggatgtgggaagaggactgtgatcagatatgtt
gctcgtcgattgggcctgcatgtagtggaatatagctgtcataatctgatagcaccctct
gaaagaaaagcatctgttgctctagctcaagctttcaatacagctcaaagatacttgcca
acaattcttcttctccgccattttgatgttttccgaaatttaggctctcatgagggttca
ccaaatgatcaagtaggcatcacttcagaagtagcatcagttattcggaaattctcagag
ccagtcactgaggatgaagacatttattctgaaggggaacctaatgatgattctaacatg
aaggatgttggaaaggtaagaaggcacagagtgttgttagttgcagctgctgacagctct
gaaggtctacctccaaccataaggcgttgctttagccatgaaataagtatgggtccttta
actgaagaacaaagggtagaaatgcttacccagtcactgcaaagtgtgtctgagctcctg
tctaatactggctcagaggattttataaaggaaattgtggggcagacatctgggttcatg
cctagagatttatgtgctttgattgctgatgctggtgcaaacttaattcccagtggcaat
gtactgaatgaaaaggttgagcccaaggaactagatagtgattcacatgaagttgcacca
caggtcctggggaaggaaggcatgaccaaagcattggaacgatcaaagaaaaggaatgcg
tcagcattgggcactccgaaggttcctaatgtgaaatgggaagatgttggtgggcttgag
gatgtgaagaaatcaattttggacactgttcagttgcctctcttgcataaggacttgttt
tcgtctgggttgcgtaagcgctctggtgttcttctttatggtcctcctggaactggaaaa
actttattagcaaaagctgttgcaaccgagtgttccctaaactttctcagtgtaaaagga
cctgagctgatcaacatgtacattggagagtcagagaagaatgttcgagacattttccag
aaggccagatcagcacgcccatgtgttatcttctttgatgaacttgattctcttgctcca
gctcggggggcctctggggattctggaggagttatggacagagtggtttctcagatgctt
gcagagattgatggcctaaatgattcaacacaggacctgtttataataggggcaagcaac
agacctgatctaattgacccagcacttttacggcctggtagatttgataagctgctatac
ataggagttaattctgatgcatcttatagggagcgggtactcaaagcactaacacgaaag
ttcaaattgcataaagacgtttcactttactcaatagcaaagaaatgtcccccaaacttc
acaggagcagacatgtatgctttatgtgcagatgcttggttccatgctgcaaaacgcaag
gttttgagttcagattcagattcttctagcactgatgatcgtgcagagtctgttgttgtt
gaatacgatgattttgtgaaggtcctagatgagctgtctccttccctctccatgtctgag
cttaagaagtacgacttgctgagggatcaatttgaaggagcctcaaaatga
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