Quercus lobata (valley oak): 115971680
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Entry
115971680 CDS
T07350
Name
(RefSeq) sister-chromatid cohesion protein 3 isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
qlo03036
]
115971680
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
115971680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SCD
STAG
PDS5
HEAT_2
Motif
Other DBs
NCBI-GeneID:
115971680
NCBI-ProteinID:
XP_030947549
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All DBs
Position
12:complement(23636056..23663496)
Genome browser
AA seq
1145 aa
AA seq
DB search
MENLAPPSETSTRPPKRPRAHQGVTENQTGKANGDRAGEANESVDRESSPEDFEELRPKS
KRSRASEGTSASAHKANDLSLIEVVKGNGKFIPQVVKLWVERYEKAPKPAMVELLMMLFE
ACGAKYHIKEEFLDETDVDDVVVALVNLARTGEVEDYQNSKRKELKNFKDNLESFWDNLV
HECQHGPLFDQVLFDKCMDYIIALSCTPPRIYRQVASLMGLRLVTSFIAVAKMLGAQRET
TRRQLDAEKKKRTEGPRLESLNKRFSTTHEQITVLEEMMRKIFTGLFVHRYRDIDPNIRT
SCIQSLGSWILSYPSLFLQDLYLKYLGWTLNDKNAGVRRASILALQNLYEADDNVPTLSL
FTERFSNRMIELADDIDVSVAVCAIGLVKQLLRHQLIPDDDLGPLYDLLIDDPPEIRHAI
GALVYDHLIAQKFNTSQSGAKGDSSASSEVHLGRMLQILREFSTDPILSIYVIDDVWEYM
KAMKDWKCIISMLLDENPLIELTDDDATNLVRLLCASVKKAVGERIVPATDNRKQYYTKA
QKEVFENNRRDVTVAMMKNYPLLLRKFMADKRKAPSLVEIILHTNLELYSLKRQEQNFRS
VLQLIKEAFFKHGEKEALRSCVKALNFCSIESQGELQDFARSELKELEDGLIAKLKAAIK
EVVDGGDEYSLLVNLKRLYELQLSRAVPIESLYEEIVMVLSSFRNMEDEVVSFLLLNMYL
HLAWCLHSIVNSETVTEASLSSLLSKRNTFFEQLDYFLNNFSEVEEMSKHGNQLACRVCT
ILAEAWFLFRKTNYTSTKLESLGYCPDTSILQKFWKLCEQQLNISDETEDEDVNREYIEE
TNRDAVMIAAAKLVAGDAVPKEYLGPEIISHFVMHGTGVAEIVKHLITVLKKKDADLSNI
FLEALKRAYRRHIVELSKSDEEPLISKSFIECKDLATRLSGTFMGTARNKHRSDILKIVK
DGIDYAFVDAPKQLSFLEGALLHFVSKLPTPDVLDIVKDVQNRTENVNTDEDPSGWRPYY
TFVDSLREKYAKNEGLQDEKEGVSVRRRGRPRKRRNIEGKRLFDEHNSSEDEDSISAYDQ
EDAQGEEEKQDEEEEEDAPLINSIRSSKLRSLRLSREENKGQTRTGDSERAADNLAASRT
SGASS
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggagaatctagctccaccttccgagacctcaacgcgtcctccgaaaagacctagggct
catcagggtgtcactgagaaccagaccggtaaggccaacggcgaccgggccggcgaagca
aatgagtccgtggaccgggagagttcgcccgaagatttcgaagagcttcgtcctaagtct
aagcggagtcgtgcctctgaaggaacttcggcctcggctcacaaggccaacgacctcagc
ttgattgaggtcgtcaagggcaatgggaaatttattcctcaagtggtcaagctttgggtt
gagcgatatgaaaaggctccaaaacctgcaatggttgaactcctgatgatgctctttgag
gcttgtggagctaagtatcatatcaaggaagagttcctggatgagacagatgttgatgat
gttgtggttgctcttgtgaatcttgccagaacaggagaagttgaggattatcaaaattca
aagaggaaggagttaaagaacttcaaagataatcttgaatcattctgggacaatttagtt
catgagtgtcaacatggaccattatttgatcaggttttgttcgacaagtgtatggactat
ataattgcactatcttgtactcctccaagaatttaccgtcaagttgcttccttgatggga
ctccgacttgtcacgtccttcatagctgttgctaaaatgctcggtgcacagcgtgaaact
actcgtagacagttggatgctgaaaagaagaaacgaactgagggtcctcgtctggagtca
ctaaataaaaggttctcaacaactcatgaacagataacagtattggaggagatgatgcgc
aaaatatttactgggttatttgtccaccgttatcgagatattgacccaaacattcgaacg
tcatgcatacagtcacttggttcatggattttatcatatccttctctgttcttacaggat
ttgtacttgaagtatcttgggtggacactgaatgacaaaaatgctggcgttagaagagct
tcgatccttgcattgcaaaatctttatgaggcggatgataatgtgccaactcttagttta
tttactgaaagattttctaaccggatgattgagcttgctgatgacattgatgtttctgtg
gctgtctgtgccataggacttgtaaaacaactactaagacatcagcttatacccgatgat
gacttgggtcctttatatgatttattgattgacgatccaccagaaatcaggcatgctata
ggagcattagtttatgatcacctgattgctcaaaagtttaacacctcccaatctggcgca
aaaggcgacagcagcgcttcttcagaggtccatcttggcagaatgttgcaaatactaaga
gagttttcaactgatcctattttaagtatctatgtcattgatgatgtttgggaatacatg
aaggctatgaaggattggaagtgtattatctccatgctcttagatgagaatccattgatt
gagcttactgatgatgatgcaacaaacttggtacggcttctgtgtgcttctgtcaaaaag
gcagttggagagaggattgtacctgctactgataatcgcaagcagtattacactaaagct
caaaaggaagtatttgaaaacaacagaagggatgtcactgttgccatgatgaagaactat
ccattgctcttgcgcaaattcatggcagacaaacggaaagcgccgtcattagttgagatt
attttgcatactaatcttgagctttattccttgaagaggcaggagcagaattttagaagt
gtccttcagcttataaaagaggctttttttaagcatggtgagaaggaggcactgagatcc
tgtgtgaaggctttaaacttttgttccattgagagtcaaggggagctgcaggattttgcc
cgtagtgaattaaaagaacttgaagatggacttattgctaagcttaaagctgcaatcaaa
gaagttgtggatggtggtgatgagtattctcttcttgtaaatttgaaaaggttgtatgag
cttcaattgtcaagggctgtgccaattgagagtttatacgaagaaattgtcatggtcctc
agtagttttagaaatatggaagatgaggttgtcagttttcttcttctgaacatgtatttg
catttggcgtggtgtctgcactctattgtaaatagtgaaactgtgactgaagcatcttta
tcttcactactatctaaacgcaacacgttttttgagcaacttgattactttcttaacaac
ttttctgaagtggaggaaatgagtaaacatggaaatcaactagcttgcagggtttgtact
atacttgccgaagcatggtttttgttcagaaagacaaattatacttcaacaaagctggaa
agtttaggatattgtccagatacatctattcttcaaaagttctggaaactttgtgaacaa
cagctcaatatttcagatgagacagaagatgaagatgtgaatagagagtatattgaggag
acaaatagagatgcagtcatgattgctgctgcaaagttggttgctggcgatgcagttccg
aaggagtatcttggtccagagattatttctcatttcgtaatgcatggaacaggtgtggca
gagattgttaagcatctgatcactgtgctaaagaaaaaagatgctgacctttccaatatc
ttcttagaagcactgaaaagggcctaccgtcggcatattgtagaactttccaaaagtgat
gaggaacccttgattagcaagtcttttatagaatgtaaagatcttgctactcggctttct
ggaactttcatgggtactgctcggaacaagcataggtcagacatcttaaaaattgtcaag
gatggtattgattatgcttttgtagatgctccaaagcagttgtcattcttggaaggcgct
ttgctccattttgtatcaaaacttcctacacctgatgtgcttgacattgtaaaggatgtt
caaaatcgtacggagaatgtaaatacagacgaagatccaagtggctggcgcccctattac
acatttgttgacagcttacgtgagaagtatgcaaagaatgaaggtttgcaagacgagaaa
gaaggggtatctgtcaggcgcaggggtcgtcctcgtaagcggcgtaatatagaggggaag
agactttttgatgagcacaattcaagtgaagacgaggattctatcagtgcttatgaccaa
gaagacgctcaaggtgaagaagagaagcaagatgaagaggaagaggaagatgcccctttg
ataaattcaattaggtcatccaagttgaggtcactgaggctttcaagagaggaaaacaaa
ggccagacaaggacaggagattcagaaagagctgcagataatttagctgcatcaagaaca
tcaggggcctccagctag
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