Quercus lobata (valley oak): 115971685
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Entry
115971685 CDS
T07350
Name
(RefSeq) sister-chromatid cohesion protein 3-like
KO
K06671
cohesin complex subunit SA-1/2
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
qlo03036
]
115971685
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
115971685
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
Motif
Other DBs
NCBI-GeneID:
115971685
NCBI-ProteinID:
XP_030947557
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Position
12:complement(23604143..23609712)
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AA seq
654 aa
AA seq
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MLLDENPLIELTDDDATNLVRLLCASVKKAVGERIVPATDNRKQYYTKAQKEVFENNRRD
VTVAMMKNYPLLLRKFMADKRKAPSLVEIILHTNLELYSLKRQEQNFRSVLQLIKEAFFK
HGEKEALRSCVKAINFCSTESQGELQDFARSELKELEDGLIAKLKAAIKEVVDGGDEYSL
LVNLKRLYELQLSRAVPIESLYEEIVMVLSSFRNMEDEVVSFLLLNMYLHLAWCLHSIVN
SETVTEASLSSLLSKRNTFFEQLDYFLNNFSEVEEMSKHGNQLACRVCTILAEAWFLFRK
TNYTSTKLERLGYCPDAPIVQKFWKLCEQQLNISDETEDEDVNKEYIEETNRDAVMIAAA
KLVAGDAVPKEYLGPEIISHFVMHGTGVAEIVKHLITVLKKKDADLSNIFLEALKRAYCR
HIVELSKSDEEPLTSKSFIECKDLATRLSGTFMGAARNKHRSDILKMVKDGIDYAFVDAP
KQLSFLEGAVLHFVSKLPTPDVLDIVKDVQNRTENVNTDEDPSGWRPYYTFVDSLREKYA
KNEGLQDEKEGVSVRRRGRPRKRRNIEGKRLFDEHNSSEDEDSISAYDQEDAQDEEEKQD
EEEEEDAPLINSIRSSKLRSLRLSREENKGQTRTGDSERAADNLAASRTSGASS
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgctcttagatgagaatccattgattgagcttactgatgatgatgcaacaaacttggta
cggcttctgtgtgcttctgtcaaaaaggcagttggagagaggattgtacctgctactgat
aatcgcaagcagtattacactaaagctcaaaaagaagtatttgaaaacaacagaagggat
gtcactgttgccatgatgaagaactatccattgctcttgcgcaaattcatggcagacaaa
cggaaagcaccgtcattagttgagattattttgcatactaaccttgagctttattccttg
aagaggcaggagcagaattttagaagtgtccttcagcttataaaagaggctttttttaag
catggtgagaaggaggcactgagatcctgtgtgaaggctataaacttttgttccactgag
agtcaaggggagctgcaggattttgcccgtagtgaattaaaagaacttgaagatggactt
attgctaagcttaaagctgcaatcaaagaagttgtggatggtggtgatgagtattctctt
cttgtaaatttgaaaaggttgtatgagctacaattgtcaagggctgtgccaattgagagt
ttatatgaagaaattgtcatggtcctcagtagttttagaaatatggaagatgaggttgtc
agttttcttcttctgaacatgtatttgcatttggcgtggtgtctgcactccattgtaaat
agtgaaactgtgactgaagcatctttatcttcactactatctaaacgcaacacgtttttt
gagcaacttgattactttcttaacaacttttctgaagtggaggaaatgagtaaacatgga
aatcaactagcttgcagggtttgtactatactggccgaagcatggtttttgttcagaaag
acgaattatacttcaacaaagctggaaagattaggatattgtccagatgcacctattgtt
caaaagttctggaaactttgtgaacaacagctcaatatttcagatgagacagaagatgaa
gatgtgaataaagagtatattgaggagacaaatagagatgcagtcatgattgctgctgca
aagttggttgctggcgatgcagttccgaaggagtatcttggtccagagattatttctcat
ttcgtaatgcatggaacaggtgtggcagagattgttaagcatctgatcactgtgctaaag
aaaaaagatgctgacctttccaatatcttcttagaagccctgaaaagggcctactgtcgg
catattgtagaactttccaaaagtgatgaggaacccttgactagcaagtcttttatagaa
tgtaaagatcttgctactcggctttctggaactttcatgggtgctgctcggaacaagcat
aggtcagacatcttaaaaatggtcaaggatggtattgattatgcttttgtagatgctcca
aagcagttgtcattcttggaaggcgctgtgctccattttgtatcaaaacttcctacacct
gatgtgcttgacattgtaaaggatgttcaaaatcgtacggagaatgtaaatacagacgaa
gatccaagtggctggcgcccctattacacatttgttgacagcttacgtgagaagtatgca
aagaatgaaggtttgcaagatgagaaagaaggggtatctgtcaggcgcaggggtcgtcct
cgtaagcggcgtaatatagagggaaagagactttttgatgagcacaattcaagtgaagac
gaggattctatcagtgcttatgaccaagaagacgctcaagatgaagaagagaagcaagat
gaagaggaagaggaagatgcccctttgataaattcaattaggtcatccaagttgaggtca
ctgaggctttcaagagaggaaaacaaaggccagacaaggacaggagattcagaaagagct
gcagataatttagctgcatcaagaacatcaggggcctccagctag
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