Quercus lobata (valley oak): 115971800
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Entry
115971800 CDS
T07350
Name
(RefSeq) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qlo03400
]
115971800
Enzymes [BR:
qlo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
115971800
DNA repair and recombination proteins [BR:
qlo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
115971800
Prokaryotic type
115971800
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
115971800
NCBI-ProteinID:
XP_030947701
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All DBs
Position
12:complement(15120229..15124646)
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AA seq
498 aa
AA seq
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MASVSSTTNKLSSSVQPPGRMRVLKERSGPSEDGPVVYWMFRDQRIRDNWALIHAVDEAN
RAGVPVAVAFNLFDQFLGAKARQLGFMLRGLKQLQLDLQESLQIPFFLFQGEAEETIPDF
LRECGASLLVTDFSPLRKVQRCKEEICKRVSDLVTIHEVDAHNVVPTWVASEKLEYGART
IRGKINKMLPECLIDFPTLQPPSRKWAATSRLIDWDDLIADVLRKGAEVPEIEWCEPGEK
AAMEVLMGSKNGFLTKRLKGYSADRNNPLKPRGLSGLSPYLHFGQISSQRCALEARRVRK
LFPQAVDTFLEELIVRRELADNFCFYQHHYDSLQGAWGWARKTLMDHASDEREHIYTREQ
LEKAKTADPLWNASQLEMVYYGKMHGFMRMYWAKKILEWTRGPEEALEISIYLNDKYEID
GRDPSGYVGCMWSICGIHDQGWRERPIFGKIRYMNYAGCKRKFDVDGYISYVKRLVGEIK
KRKSESLLSQKAKELRSS
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgtttcttcgacgacgaacaagttatcgtcgtccgtacaaccaccggggcga
atgagggttttgaaggaacgatctggaccgtcggaggatggtcccgttgtgtactggatg
ttcagggatcaacggatcagagacaactgggctttgatccacgccgttgatgaggccaac
agggccggtgtacccgtggccgtggcgttcaacctcttcgaccagtttcttggcgcgaaa
gctcggcaactagggtttatgttgcggggtttgaagcagttgcagctcgatctccaagag
agtcttcaaatccctttctttttgtttcagggagaagcagaagagactataccggatttt
ttgagagaatgcggggcttcacttttagttacagacttctcacctttacgcaaagttcaa
agatgtaaagaggaaatttgcaagagagtgagtgatttggtgaccatacatgaggttgat
gcccacaatgtagtacctacatgggtggcatcggagaagttggagtatggcgctagaacc
ataaggggaaagataaacaaaatgcttcctgagtgcctcattgattttcctacattgcaa
cctccaagtagaaaatgggctgccacaagtcggttgattgattgggatgacctcattgcc
gatgttttgaggaaaggagcagaagttcctgaaattgagtggtgtgaaccaggggagaag
gcagcaatggaagtgttgatggggagtaaaaatgggttcttgacgaaaaggttgaaaggt
tattcagcagataggaataacccattaaaacctagagggctttctggtctctccccatac
ttgcactttgggcaaatatcttcgcaacggtgtgctttggaggctcgtagggtcaggaaa
ctttttcctcaggcagttgatacattcttggaggagttgattgtgcgcagagaacttgct
gataacttctgcttctatcagcatcattatgattcactgcaaggagcatggggatgggca
cgtaagaccttgatggaccatgcttctgatgagcgagaacatatttacaccagggagcaa
ttggaaaaggcaaaaacagccgatcctctctggaatgcttctcagttggagatggtttac
tatggcaagatgcatggttttatgcggatgtattgggccaaaaagattcttgagtggaca
agaggaccggaagaagcacttgaaatatcaatatatctgaatgacaagtatgaaatagat
gggagggacccaagtggatacgttggttgcatgtggtcaatatgtggcattcatgaccag
ggctggcgggagcgaccaatttttgggaaaatacgttacatgaattatgcgggctgcaaa
aggaaatttgatgttgatggatacatttcttatgttaaaaggctagtgggtgagattaag
aaaagaaaatcagaaagcctgctcagtcagaaggcaaaggaacttcgcagctcataa
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