Quercus lobata (valley oak): 115971835
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Entry
115971835 CDS
T07350
Name
(RefSeq) uncharacterized protein LOC115971835 isoform X1
KO
K24737
WD repeat-containing protein 6
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
qlo04990
]
115971835
Domain-containing proteins not elsewhere classified [BR:
qlo04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
115971835
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_Aladin
Motif
Other DBs
NCBI-GeneID:
115971835
NCBI-ProteinID:
XP_030947768
UniProt:
A0A7N2N5V7
LinkDB
All DBs
Position
12:34340800..34355692
Genome browser
AA seq
1458 aa
AA seq
DB search
MSKSMAEETRTQWSLQCSQYLGEISALCFLHFPTHLSSLPFLLAGSGSQLMLYDLESGKM
LRSFHVFDGIRVHGITCLFIDCTEGTVSSKLGFQLAVFGESRVKLFSLVIELFLGTQNQS
EVSVNLNLLHLLPKFGNWVLDVCFMKGFVSSYNEGSHCLAIGCSDNSVHVWDILNSIVIL
EVQSPERCLLYSMRLWGDNIEALRIASGTIFNEILVWKVVPKYNAPSSKSPVEDHFDQSY
PFSNHVLFHYQQFEAVHMDKLAGHEGSIFRITWSSDGSNLVSVSDDRSARVWAVHAERNG
SDKPGYSIVPELDGVVLFGHNARVWDCCISDSLIVTAGEDCTSRMWGLDGKQLLMIKEHI
GRGIWRCLYDANSSLLITAGFDSAIKVHQLHGFWSKGSDGRAEVKEFIDRTEIFTARIPA
SSEHNGLMDSKSEYVRCLHFTCEDSLYVATNQGYLYHAKLSKTRDVKWTELVQVSNEVPI
VCMDILSLKSSELSGGVEDWLAVGDGKGYMTIVKVLSDVSAPKVSLTFSWQAGMERQLLG
TYWCKSLGYRYIFTTDPKGTLKLWGLYDPSPSVSHSSAGHYNVSLIGEFASCFGIRILCL
DASFEEEVLVCGDLRGNLVLFPLLKSLLLNTSVASEEKMSPINYFKGVHGISSVSSVSFA
RLSSNQIEICSTGGDGCICYLEYDRDQKHLEFIGMKQVKELSLIQSVSEDNDSVDDLASG
RYAAGFASVDFIIWNLITETKVVQIPCGGWRRPHSYYLGDVPEMKNCFAYVKDEMIYIHR
NWILDGEGKIIPRNLHVQFHGREMHSICFVSENLQLRANGKHNLYSRFSWIATGCEDGTV
RLTRYTPGVENWSASKLLGEHVSGSAVRSICCVSEIHVFASEANTISDGRNRQVVDTDNG
ENPFLLISVGAKRVLTSWLLRNRRLDKEEALADQQYSEIGSSNKPSSGVSSSMSFQWLST
DMPAKYSSSHKYPEDAEKLVGAAENVSSTKVDAISHFQGKGKMDIKPCLGDKYEDDWRYM
AVTAFLVKYAGSRLTVCFVVVACSDATLALRALILPYRLWFDVALLAPLSSPVLALQHVI
VPICLPSEESIQKGKVYIVISGATDGSIAFWDLTGSIEAFMLRVSTLHVEKFIDCQKRPR
TGRGSQGGRWWRSLSSSLSKRRVGSGLVTTKGGDGTDHNKLNHVASRTELLINDSESSAA
ACSQATTSLQLEVNTDDSSSETCEIRPSHVLNNVHHDSESSAPACSQATASLQSEVNTDD
SSSEIYEIRPLHVLNNVHLSGVNCLHVSDIKDCQSSLGGFLFNIISGGDDQALNYLRFEL
FLLATVTDDEFVTPDIRNSISGPEITRPFVTYGENQNKNYAIKFLYHEKIASAHSSAIKG
VWTDGCWVFSTGLDQRVRCWSFEKHGKLTEHGCLVISVPEPEALDARACGRNNYQIAVAG
RGMQIVEFSGICEMDGGE
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatcaatggctgaagagactcgaacccagtggagtttacaatgcagtcagtac
cttggagaaatctcagccctctgtttcctccacttcccaacccacctctcttctctccct
tttctcctcgctggttcgggttcacaactcatgctttacgatttagaatcaggaaagatg
ttaaggtcctttcacgtattcgatgggattcgcgtgcatggcattacttgtttattcatt
gattgtacggaaggaactgtttcctctaagcttggctttcaacttgctgtctttggtgaa
agcagagtcaaactctttagccttgtcattgaattgtttctgggtactcaaaatcagtcc
gaggtttctgtgaatttgaacctattgcatttgttgcccaagtttggcaattgggttttg
gatgtttgttttatgaagggctttgtgagttcttacaatgaggggagccattgtcttgca
atagggtgtagtgacaactccgtccatgtgtgggatatcttgaattctattgtgattctt
gaagttcagtctccagagaggtgcctcctttattccatgaggctatggggtgacaatatc
gaagctctccgtattgcatctggtactatttttaatgagattcttgtttggaaggtggtt
cctaagtataatgctccatcttcgaagagtcctgtggaagaccattttgatcagagctat
ccattttccaaccatgtcctatttcattatcagcagtttgaagctgttcatatggataaa
cttgctggacatgaaggatcaatcttccgcataacctggtcctctgatggttccaatctg
gtatctgtctctgatgatcgtagtgctcgtgtttgggcggttcatgctgaaagaaatggt
tctgacaagcctgggtattctattgtgcctgaacttgatggtgttgtgctgtttggtcac
aatgctagagtttgggattgctgtattagtgattctttaattgtcactgcgggtgaggat
tgcacatctcgcatgtggggattggatggaaagcagcttctgatgatcaaggagcatata
ggaaggggcatttggcgttgtttgtatgatgcgaactcttcgcttctcattactgctgga
tttgattctgcaattaaagtgcatcagctgcatggtttttggtctaagggctcagatgga
cgtgctgaggtaaaagagtttattgacagaacagagatattcactgctcgtatccctgct
tcatcagagcataatggactaatggacagcaaaagtgaatatgtccgttgtttacatttc
acatgtgaagattccctttatgttgccacgaatcagggttatctttaccatgctaaatta
tccaaaaccagggatgtaaaatggactgaacttgtccaagtcagtaacgaggttcctatt
gtatgtatggatattttatccctaaaatcatctgagctttctggtggtgttgaggattgg
cttgctgtgggagatggtaaaggatacatgacaattgtcaaagttcttagtgatgtttct
gctcctaaagtgagcctcacatttagctggcaagctggaatggagagacagctcttagga
acttattggtgcaagtcattgggatataggtacatcttcaccactgatcctaaaggaacg
ttgaagctgtgggggttatacgatccttcaccatcagtttctcacagctctgcagggcat
tataatgtgtctctaattggggaatttgcatcatgttttggaataagaatattgtgtttg
gatgcatcttttgaggaagaggttctggtgtgtggggacttacgtggtaatttggtgcta
ttcccattgttgaaaagcctattgctgaatacatcggttgcctcagaagagaagatgtcc
ccaataaattattttaagggagtacatgggatatcaagtgtgtccagtgtttcatttgct
agattaagctccaatcagattgaaatatgttcaactggaggagatgggtgcatatgctat
ttggaatatgacagagatcagaaacacttggaatttatagggatgaaacaagtgaaagaa
ttgagtttgattcaatctgtatctgaagataatgactctgttgatgatttggcaagtggt
cgctatgcagctggttttgcatcagtagattttataatatggaacttgataactgagaca
aaggttgtgcaaataccatgtggtggatggcggcgtcctcattcttattatcttggtgat
gtaccagagatgaagaactgctttgcatatgtcaaggatgaaatgatctatattcataga
aattggatacttgatggggaggggaaaataatccccaggaatttgcatgtgcaattccat
gggagagagatgcattccatatgctttgtatctgaaaatttgcaactcagagctaatggg
aagcacaacctttattctagatttagttggattgcaactggctgtgaagatggaactgtc
aggttgactaggtatacaccaggtgttgagaattggtctgcatcaaaattgcttggggag
catgttagtggatcagctgtaagatcaatatgctgtgtgtcagagatacacgtatttgca
tcagaagcgaacaccatatccgatgggaggaacagacaagtcgttgacacggataatgga
gagaatccatttttactgatttcagttggtgcaaagcgggtcttgacttcttggttacta
agaaataggaggttagacaaggaagaagcacttgctgatcagcaatatagtgaaattgga
agtagcaataagccttcatcaggagtgtcctcatcaatgtcatttcagtggctttctact
gacatgccagccaagtattcaagctctcataaatatccagaagacgctgaaaaattagtt
ggtgcagcagaaaatgtttctagtacaaaagttgatgcaatatcacattttcaagggaag
gggaagatggacataaagccttgccttggagataaatatgaagatgattggagatacatg
gctgtcactgcttttcttgttaaatatgctggttccaggttaactgtctgctttgttgtt
gttgcttgttcagatgcaacacttgcgctgagggctctaatcttgccctatcgtttatgg
tttgatgttgctctgttggctcctctatcatcaccagttttggcattgcagcatgtcatt
gtcccaatatgtcttccttctgaagaaagcattcagaaaggaaaagtgtatattgtgatt
agtggagctactgatggtagtattgccttctgggatttgactgggagtattgaagctttt
atgctgcgggtgtcgactcttcatgtagaaaagttcattgattgtcagaaacggccacgc
acagggaggggaagtcagggggggcgatggtggagatcattaagcagtagtctatctaag
agaagagtaggcagtggtttagttacaacgaaaggtggagacggaacagatcacaataag
ctaaaccatgttgcaagtagaacagaattgctaataaatgattctgaaagtagtgctgca
gcttgttctcaagccactacctcccttcagttagaagtgaatacagatgactcctcatct
gagacatgtgaaataaggccttcgcatgttctaaataatgttcaccatgattctgaaagt
agtgctccagcttgttctcaagccactgcttcccttcagtcagaagtgaatacagatgac
tcctcatctgagatatatgaaataaggcctttacatgttctaaataatgttcacctatct
ggtgttaattgtcttcatgtttcagatataaaagattgtcaaagttctctcggtggtttt
ttgttcaatataataagtgggggtgatgatcaagctcttaactatcttagatttgaattg
tttctattagcaacagtcacagatgatgagtttgtgacaccagacatcagaaattcaatt
agtggacctgaaattacaaggccttttgttacttatggagaaaaccagaacaagaattat
gccatcaaattcttatatcatgagaaaattgcatcagctcacagctctgccataaaaggt
gtttggacggatggctgttgggtgttctctactggtcttgatcagcgtgtcagatgctgg
agttttgaaaaacacggaaaattaactgagcatggttgtttagtcattagtgtgccagag
ccagaagcattggatgctagagcctgtggcagaaacaattatcagattgctgttgctgga
agagggatgcagattgttgagttttctggaatctgtgaaatggacgggggagaatga
DBGET
integrated database retrieval system
