KEGG   Quercus lobata (valley oak): 115971839
Entry
115971839         CDS       T07350                                 
Name
(RefSeq) decapping 5-like protein
  KO
K18749  protein LSM14
Organism
qlo  Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:qlo03019]
    115971839
Messenger RNA biogenesis [BR:qlo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     115971839
SSDB
Motif
Pfam: LSM14 FDF SM-ATX
Other DBs
NCBI-GeneID: 115971839
NCBI-ProteinID: XP_030947773
UniProt: A0A7N2RE79
LinkDB
Position
12:complement(3577772..3584459)
AA seq 552 aa
MATETAAAKDASSSSSSAAAAAESYIGSFISLISKSDIRYEGLLSFLNVNDSTIGLNNVR
SFGTEGRRKDSPQIPPGDKVYEYILFRASDIKDLQVKASPPVQTEEQIHNDPAIIQSHYA
GVHLSSPPFASVGGKTLTESTRWQDTPALTSRTYTGVLPSYQSVSQPATQLVGSPSSSMP
MYWQGYNGTSGGISHASQQPIPFQPPSTGSFPLTMQGQWQTPEIQTPTTLSLPNTSEFGS
PVSSYIASASVHPKYLPSTSPVQSSTSLDIPSFLSTKSSLPHSESLTANRSTVSSFPLSR
EDLNTSENQIVGKAVSDSQSVLPVQSMSYPSSFADSSGPLLTPPPPLLTPDQLAQSRPHA
LSSIQKLYPVQTDMSAPIPTSSYSSSSFSIPVSQAPLLPLPTSTRQPQYSATQFTEEFDF
TAMNEKFKKDEVWGYLGKGKDKTGGVQGFTTGQSLGDREGHGLIPNPKPAYDKDEFFDTI
SCNSLARGARNGQNRFSERIKQDTETFGNIQQRPNLGYGGYAAGHGDNYRSSYNWGRGHG
YGGRRHGDNMPF
NT seq 1659 nt   +upstreamnt  +downstreamnt
atggcgactgaaaccgctgctgccaaagacgcttcgtcttcttcgagttcggcggcggcg
gcggcggaatcgtacataggaagcttcataagcctgatttccaagtccgatattcgctac
gaaggactcctctccttcctcaacgtcaacgattccaccattggcctcaacaacgttagg
tcttttggaacagaggggcgaaggaaagatagcccgcaaattccaccaggtgataaggtg
tatgaatacattctgttccgagcaagtgacattaaagacttgcaagttaaagcctcccca
cctgtccaaacagaagagcagattcacaatgatcctgctatcatccagtcgcactatgct
ggggtgcatttgagttctccaccttttgcttctgttggtggtaaaaccttgacagaatca
actcgatggcaagatacccctgctttgacaagcagaacctatactggagtactgccttca
tatcaatctgtatcccaacctgctacacaacttgttggttctccatcttcttctatgcca
atgtattggcaagggtacaatggaacatcgggtggtatatctcatgcttcacagcaacct
attccttttcaacccccatcaactggatcatttcccttgacaatgcagggtcagtggcag
actcctgaaattcagacacctacaaccctgagcctgccgaatacatcagaatttggtagc
cctgtatcttcatatattgcttctgcttctgtacatccaaaatacttaccctctactagt
ccagtacagtcttctacttctcttgatattccgtccttcttgtccacaaaatcatcctta
ccacattctgaatctttaactgctaacagatcaactgtgtcttcatttcctttgtctcgt
gaagacttaaacaccagtgaaaaccaaattgttggtaaagctgtgtctgactcacaatcg
gttctccctgtccagtccatgtcttatccatcttcatttgcggattcttcaggccccttg
ctaacacctcctccaccattgttaactccagatcagttagcacagtctagaccacatgcg
ctttcttccatccagaaactctaccctgttcagactgatatgagtgctccaattccaaca
tcatcttattcttcatcatcattttctattccagtatctcaagcacctcttttgccattg
ccaacttctacaagacagcctcagtattcggctacacaattcacagaagagttcgatttt
acagccatgaatgaaaagtttaaaaaagatgaagtatggggttatcttggaaagggtaag
gataaaacagggggagttcagggctttacaactggtcaaagcttgggggacagagaaggt
catggcttaatacctaatcccaagcctgcatatgataaggatgagttctttgatacaatt
tcttgtaattcgcttgcccgtggtgcaaggaacggacagaacaggttctctgagcgaatc
aagcaggatactgagacatttggcaatatccaacagagacctaatctaggttatggtggt
tatgctgctggacatggtgacaattaccggagctcatataactggggaaggggacacggt
tatggtggaaggaggcacggtgataacatgcctttctaa

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