Quercus lobata (valley oak): 115971847
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Entry
115971847 CDS
T07350
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
115971847
Enzymes [BR:
qlo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
115971847
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
115971847
NCBI-ProteinID:
XP_030947783
UniProt:
A0A7N2N6H5
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Position
12:complement(39763799..39770183)
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AA seq
640 aa
AA seq
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MPLLGVQLHIGDRHVVMDNGILQVTLSNPDGIVTGVQYNGIDNLLEVLNDESNRGYWDLV
WSSPGSTGTTGTFDVIKGTSFKVIVQTEEQVELSFTRTWDPSLGSKLVPLNIDKRFIMLR
GSSGFYSYAIYEHLKDWPAFSLDETRIAFKLRKDKFHYMAIADNRQRYMPLPDDRLPSRG
QALAYPEAVLLVNPVEPELKGEVDDKYQYSCNNENNQVHGWISINTGVGFWQITPSNEFR
SGGPLKQNLTSHVGPTTLAMFLSAHYSGEDLVPKFEAGEQWKKVFGPVFMYVNSVYVGDD
PLQLWEDAKTQMMIEVQSWPYSFPASEDFPKSDQRGNVSGRFLVQDRYLSNDYISANGAY
VGLAPQGDIGSWQRECKDYQFWSKADEDGYFSINEICIGDYNLYAWVPGFIGDYRYDVVI
NITADCDIDMGDLVYEPPRDGPTLWEIGIPDRSAAEFYVPDPNPKYINKLYVNHPDRFRQ
YGLWERYAELYPDKDLVYTVGVSDYTKDWFYAQCTRKKDNNTYQGTTWQIKFNLDNVDHN
ATYKLRVALASATLSELQVRVNDPKANPLFSSGLIGKDNSIARHGIHGLYWLYNVDVPGG
RLVEGDNTIFLTQPRGASPFQGIMYDYIRLEGPPSSTSGK
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgccacttctgggggtgcaattacatattggagatcgtcatgtggtaatggacaatggc
atactccaagtcacattatcgaatcctgacggaattgttactggagttcaatataatggc
attgacaacttgcttgaagtccttaacgatgaatcaaatagagggtattgggaccttgtt
tggagctcaccaggaagtacaggaacaactggtacatttgatgtaatcaaaggaacaagt
ttcaaggttatagttcaaactgaggaacaagttgagctctcattcacaagaacgtgggat
ccctctctggggagcaagcttgtcccattaaatatcgacaaaaggtttataatgcttcga
ggttcgtcgggcttctactcttatgccatttacgagcacctcaaggattggcctgctttc
agcctcgacgaaactaggattgctttcaagctcagaaaagacaagttccattatatggcg
atagcagacaataggcaaagatacatgccccttccggatgatcgattaccttcaagaggt
caagccctagcctatccagaggcagtccttctagtcaaccctgtggagccagagttaaaa
ggagaggtggatgacaagtaccagtattcatgtaacaacgaaaataatcaagtacatggg
tggatctccattaacacaggtgtgggattctggcaaatcacacctagcaatgaatttcga
tcaggtggtcctctcaagcaaaacctaacctcacatgtgggccccacgaccctcgctatg
tttcttagtgcacattattccggagaggatctagtgccaaaatttgaagccggtgagcaa
tggaagaaagttttcggcccagtttttatgtacgttaattctgtatatgttggagacgac
ccacttcagctatgggaggatgctaaaacacagatgatgattgaagtccaaagctggccc
tatagctttcctgcttctgaggatttccccaagtcagaccaacgtggtaacgttagtggt
agatttctagtccaagacaggtatcttagcaatgactatatatccgctaatggcgcttat
gttggcttggctcctcaaggtgacattggatcatggcaaagagaatgcaaggactaccaa
ttctggagcaaagcagatgaggatggctatttttcaattaacgagatatgtattggggac
tataatctctatgcttgggtcccaggttttatcggggattacagatatgatgttgtcatt
aacataactgcagattgtgatattgacatgggtgatcttgtttatgagcctccaagagat
ggccccactctatgggaaattggcatccctgatcgttctgcagctgaattttatgttcct
gatcctaatccaaagtatatcaacaaactctatgtcaatcatcctgacaggtttagacag
tatggcttgtgggaaagatatgcagaactctatcctgataaagacttagtttacacagtt
ggcgtgagtgattacactaaagattggttctatgctcagtgtaccaggaaaaaagacaat
aatacgtatcaaggaactacatggcaaatcaaatttaatcttgacaatgtggatcataat
gctacttataagttgcgagtagcactggcatctgccactctttctgaattgcaggttcgg
gttaacgatccaaaagcaaatcctctgttttcaagtggactaatagggaaggacaattca
attgctagacatggaatccacgggctctattggctttacaatgtggacgtaccaggtggt
cggcttgttgaaggggataatactatttttttgacacaaccaagaggtgccagccctttc
caagggattatgtatgattatatccgtttagaaggtcccccatcttctacttccgggaaa
taa
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