Quercus lobata (valley oak): 115971872
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Entry
115971872 CDS
T07350
Name
(RefSeq) ABC transporter B family member 4-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115971872
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
qlo02000
]
115971872
04147 Exosome [BR:
qlo04147
]
115971872
04090 CD molecules [BR:
qlo04090
]
115971872
Enzymes [BR:
qlo01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
115971872
Transporters [BR:
qlo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
115971872
Exosome [BR:
qlo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115971872
CD molecules [BR:
qlo04090
]
Proteins
115971872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
RsgA_GTPase
AAA_29
AAA_16
ABC_ATPase
AAA_21
Zeta_toxin
AAA_30
AAA_25
AAA_5
SbcC_Walker_B
DUF87
DUF815
AAA_15
Motif
Other DBs
NCBI-GeneID:
115971872
NCBI-ProteinID:
XP_030947817
LinkDB
All DBs
Position
12:34867793..34873563
Genome browser
AA seq
1251 aa
AA seq
DB search
MIFGTIGAIANGLGSPLMTIVFGDLIDSFGNNKNLVHEVSKISLKFVYLAVGIGFAAFLE
VTCWMVTGVRQAARIRGLYLKTMLRQDVAFFDKEINTGEIVGRMSGDTILIEDAMGEKVG
NFLQLISTFFGGFIIAFVRGWLLTLAMCSAIPFIGIAGTIMSLVISKMSSRGQGAYAKAA
NVVEQTIGEMKTVASFAGEKQAITNYCKFLEYAYKSAVYEGLAAGVGIGVVLLVAFGSYG
MAVYIGAKFILTKGYTGGKVMNILLAVLTSSKSLGQASPCMSAFAAGQAAAFKMFETIKR
KPEMDLSTNGKKLDDIRGDIELRDVYFSYPARRDEQIFNGFSLYIPGGTTAALVGQSGSG
KSTVISLIERFYDPQVGEVLIDGINLKEFQLKWIRWKIGLVSQEPLLFGSSIKDNIAYGN
DGAAIEEIRAAAELANAAKFIDKLPQGLDTMVGERGTQLSGGQKQRIAIARAILKDPRIL
LLDEATSALDTESERVVQEALDRIMVNRTTVIVAHRLCTVRNADMIAVIHKGKLVEKGSH
SELLKDPDGAYSQLIRLQEANKVSKQDVNDQNKSEINVESFRQSSKRKAILKSISSKNKS
EITVESFRQSSKRKTILKSISRGSSELGNSSSRSLSLAFGLPTGLNLTDAATEEPDSPSV
AQQQAPEVSLRRLAYLNKPEIPVVLIGTVASSISGVVFPIYSILASSVIKTFYEKPHELR
KDSKFWALMFLVLGLVSLLTNPMQSYFFALAGSKLIERIRSMCFEKVVHMEVGWFDEPEN
SSGIIGAKLSSDAAKVRALVGDALAKMVQDIVTVITALVIAFFASWELAFIILSLVPLLG
VNDYVQQRFMKGFSANSVKMYEEASQIANDAVGGIRIVASFSAEEKVMQLYEEKCQGPMK
AGIKQALISGFGFGISFFLLYNVNAISFYAGGCLVQDGKTTFTSVFKVFFALTTAASALS
KSSSFFKDFHRAKTAAASIFAIIGRKSKIDPSDESGMTLDNIKGEIKLFHVSFKYPSRPD
IQIFKDLHLTIRAGKTIALIGESGSGKSTVISLLERFYDPDSGHIILDGIDIQKLQLRWL
RQQMGLVSQEPALFNETIRANIAYGKGENVTEAEILAASELANAHRFISGLQQGYDTTVG
ERGVQLSGGQKQRIAIARAIIKSPKILLLDEATSALDAESERVVQDALDRVMVNRTTVMV
AHRLSTIKNADLIVVVRNGIIVEKGKHEALIKIKDGFYSSLVALHMSASTA
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgatctttggcacaataggagccatagctaatgggttaggctccccgcttatgacaata
gtgtttggggatttgatcgattcttttggcaataacaaaaaccttgtccacgaagtttcc
aagatctccttaaaatttgtctacttggccgtggggattggttttgcagcattcctcgag
gtgacatgttggatggtcacaggggtgagacaggcagcaagaataaggggtttgtatttg
aaaaccatgttgagacaagatgttgctttctttgataaggaaataaacacaggagagatt
gttggtagaatgtctggtgacacaattctcatagaagatgccatgggtgagaaggttggg
aattttctccagcttatatcaaccttcttcgggggctttataatagcatttgtcagagga
tggcttcttactcttgccatgtgtagtgctattccttttattgggatagctggcactatt
atgtctctggtcatatccaagatgtcatcccgtggacaaggtgcttatgcgaaggcagca
aatgtagttgaacaaacaattggtgaaatgaaaaccgttgcatcatttgcaggggagaag
caagctataacaaattactgcaaatttcttgaatatgcttacaaatcagctgtttatgaa
ggcttagctgctggagtaggtatcggtgtggttttgttagttgcgtttggttcttatggt
atggctgtctatattggggcaaaattcattctgacaaaaggatatactgggggtaaagtg
atgaacattcttctcgcagtgttaacatcctccaaatctctaggccaggcatctccctgc
atgagtgcatttgctgctggccaagcagcagcctttaagatgtttgagaccatcaagagg
aagccagagatggatctttccacaaatgggaaaaagttagatgacattcgcggagatata
gaattgagggatgtttattttagctatccagccagacgagatgagcaaatattcaatgga
ttttcgctttatatccctggtggcacaactgcagctttagttggacagagcggaagtggg
aagtcaacagtgatcagtctcatagagagattctatgacccacaagttggcgaagttctt
atagatggcattaacctcaaagagtttcagcttaaatggattaggtggaaaatcggcctt
gtcagccaagaacctctgttgtttggctccagcattaaggataatattgcatatggaaat
gatggtgcagctattgaagagataagagcagctgctgaacttgcaaatgctgctaagttc
attgataaattgccacagggactagataccatggttggtgaacgtggaacacagctgtct
ggtggacagaagcagaggattgccatagctagagcaattctgaaagacccacgaatatta
cttctggatgaagctacaagtgcacttgacacagaatctgagagggtagtgcaagaggca
ttggacaggattatggtcaaccgaacaactgttattgttgcccatcgtttatgcacggtg
aggaatgctgatatgattgcagtcattcacaaaggaaaattggttgaaaaaggttcgcac
tcagaactactcaaggatcctgatggagcatattctcagcttatacgcttgcaagaagca
aataaggtgtcaaaacaagatgtaaatgaccaaaacaaatctgaaattaatgtggaatct
tttagacagtcaagtaaaagaaaggcaatcctaaaatccataagtagcaaaaacaaatct
gaaattactgtggaatcttttagacagtcaagtaaaagaaagacaatcctaaaatccata
agtaggggatcatctgaattgggaaatagcagcagccgctcactctctcttgcatttggc
ttacccacaggacttaacctcactgatgctgcaacagaagaaccagatagcccttcagtt
gcacagcaacaagctccggaagtctcactacgtcgccttgcctacctcaacaagccagag
attccagtggttctaattggaacagtagcatcaagcataagtggtgtggtatttccaatt
tatagcatactagcctctagtgtaatcaaaacgttctatgaaaaacctcatgaactaaga
aaggattcaaaattttgggctctaatgtttctagtccttgggctggtatcacttctgaca
aatccaatgcaatcatacttttttgctctggctgggagtaagttaattgaacgcatcaga
tcaatgtgttttgaaaaggtggttcacatggaggttggttggttcgatgagcctgagaac
tcaagtggcattattggtgcaaagctctcatcagatgcagctaaggtgcgtgccctagtt
ggcgatgcactagctaaaatggttcaagatattgtgaccgtgattacagctttggtcatc
gctttttttgctagttgggagttggcttttattatcctttcactggttcctctccttggg
gtcaatgattatgttcaacaaaggttcatgaaaggatttagtgcaaattcagtgaaaatg
tatgaggaagcaagccaaatagctaatgatgctgttgggggaataagaattgttgcttct
ttcagtgctgaagagaaggtgatgcaattatatgaagagaaatgtcaaggccctatgaag
gcaggcataaagcaagccttgattagtggatttggatttgggatatctttcttcttactg
tataatgtcaatgccattagtttctatgctggaggttgtctcgttcaggatggcaaaaca
acattcacatctgttttcaaagttttctttgctttgaccacagcagcttcagctcttagt
aaatcaagttccttttttaaagattttcatagagccaagactgctgctgcttccatattt
gcaataataggccgcaaatcaaagatagacccaagtgatgagtctgggatgacattggat
aatatcaagggagagattaagctttttcatgtaagctttaagtacccatctaggccagat
attcaaattttcaaggacctccacttgactattcgtgcaggcaagacaatcgccttgata
ggagaaagtgggagtggaaaatccacagtgatatcattattggaaagattttatgatcct
gattcaggtcatattatacttgatggaattgatattcaaaagttacaattaaggtggcta
aggcagcaaatgggccttgtgagccaagaaccagctttattcaatgaaactatccgtgcc
aacattgcatatggaaagggagaaaatgtaactgaggcagagattttagcagcatcagaa
ttggccaatgcccacaggttcattagtggcttacaacagggttatgatactacagttgga
gaacgaggagtccaattgtcaggtgggcaaaagcaacgtatagccattgcacgggctata
attaaaagcccaaagatattactactagatgaagccaccagtgcactagatgctgagtct
gagagagtggttcaagatgccttagaccgagtcatggtgaaccgaactacagttatggta
gcccatcgactatctacaatcaagaatgcagatttaattgtagtggttagaaatggaatc
attgtagagaaaggaaaacatgaggctttgattaaaatcaaggatggcttctattcctcc
ttggttgcacttcacatgagtgcttcaactgcttag
DBGET
integrated database retrieval system
