Quercus lobata (valley oak): 115971915
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Entry
115971915 CDS
T07350
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
qlo01001
]
115971915
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qlo04121
]
115971915
Enzymes [BR:
qlo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
115971915
Protein kinases [BR:
qlo01001
]
Serine/threonine kinases: Other
Other
115971915
Ubiquitin system [BR:
qlo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
115971915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR5
LisH
WD40_CDC20-Fz
WD40_Prp19
ANAPC4_WD40
Beta-prop_EML_2
LisH_PAC1
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
115971915
NCBI-ProteinID:
XP_030947877
UniProt:
A0A7N2N568
LinkDB
All DBs
Position
12:30889167..30899813
Genome browser
AA seq
1976 aa
AA seq
DB search
MEAAMNDQANQGEDEEAQPPQPPPVSESQPQSQAEEEEDDEEEEEEEEPRNEDDELIAKA
QKLMEKITSSPENPSSSALHALASLLETQESRYMEENGHSPNNIRASHNIGRLGSLVREN
DDFFELISSKFLSEARYPPSIQAAASRLLLSCSLTWIYPHVFEEAVLENIKNWVIDDASR
IPSVDHKCPDYEMLKTYSTGLLAVSLAGGGQVVVEDVLTSGLSAKLMRYLRVRVLGETNT
SQKDANHLTENKTASAAIIIRGRDEGRGRVRQVLETTYLDDLRGAEERSIDDQCVERDQD
RSIVWQGRGEECWVNDGEPPNALDEETDSYVADADGEDRWHSRDLRDGKNKFGDFDENTR
DDSLRRRTNRGLRSRSKGRVNEGALENEQLLTSPGSGSRLGQGRSTMRSFSRHLDIKKVP
DARKSYGRITSDAVPVEREDNDDCYQECSIGSKDISDLVKKAVRAAEAEARAADAPAEAI
KAAGDAAAEVVKSAAFEEFKNTNNEEAAVLAASRAASTVVDAGNALEVSRSSITVKDDTM
IQGGPEAETSEDVEEYFIPDSESLAQSREKYCIQCLEILGEYVEVLGPVLHEKGVDVCLA
LLQRSSKHKEASKIAILLDIMKLICALAAHRKFAALFVDRGGMQKLLAVPRVAQTFLGLS
SCLFSIGSLQGIMERVCALPSDIVHQVVELAIQLLECSQDQARKNAALFFAAAFVFRAVL
DAFDAQDGLQKLLILLNDAASVRSGVNTGALGLSSSGSFRNDRSSAEVLTSSEKQIAYHT
CVALRQYFRAHLLLLVESIRPNKSNRIAARNISSIRAAYKPLDISNEALDAVLLQLQKDR
KLGPAFVRTRWPAVEKFLSSNGHITLLELCQAPPVERYLHDLLQYALGVLHIVTLVPNTR
KMIVSATLSNNRVGIAVILDAANSASSYVDPEIIQPALNVLVNLVCPPPSISNKPPLLAQ
GQHSVSAQTSIGPAIETRDRNTERNISDRAVNSSSQSDQRDRNGDSSVVDRGSAAGGTQS
VSGTSQTPVAPATSGLVGDRRISLGAGAGCAGLATQLELGYRQAREAVRANNGIKVLLHL
LQPRIYSPPAALDCLRALVCRVLLGLARDDAIAHILTKLQVGKKLSELIRDSGSQTTGTE
QGRWQAELSQAAIELIAIVTNSGRASTLAATDAATPTLRRIERAAIAAATPITYHSRELL
LLIHEHLQASGLGSTAAALLKEAQLTPLPSLAAPSSLTHQSSSQEAPSMQLQWPSGRAPS
GFFTEKSKPAARDEDTGLKYDSTIFSSKKKPLAFSPSFGFQSKNQLLSHDSHSASVRKIF
MTSKQSSEHAIVSETPARSETPSESLPNPNFDAESQYKTPIVLPMKRKLSELKDIGSFSF
SGKRFHASEQGLRSPVFPTPNTFRKSNLLVDTIGLSSPSSNLRDQHGRSTPSSCLGDYVD
DSPYTNIHTGQVTPFPQLGLLNDPQAISTERLTLDSLVVQYLKHQHRQCPAPITTLPPLS
LLHPHVCPEPKRSLEAPSNVTARLGTREFRSMYGGVHGNRRDRQFVYSRFRPWRTCRDDV
VSLLTCINFLGDSSRFAVGTHTGELKIFDSNSNNVLESCISHQSPMTFIESYLSGETQLV
LSSSSQDVRLWDASSISGGPMHPFEGCKAARFSNAGNIFAALSSEPGRREIFLYDIQTFQ
LELKLSDTYASSTGRGHIYSPIHFSPSDAMLLWNGVLWDRRVPTPVHRFDQFTDYGGGGF
HPAGNEVIINSEVWDLRKFRLLRSVPSLDQTMITFNARGDVIYAILRRNLEDAMSAVHTR
RSKHPLFAAFRTVDAVNYSDIATIPVDRCVLDFATEPTDSFVGLITMDDQEEMISSARVY
EIGRRRSTDDDSDPDDAESEEEDEDDDDDDDDGDMDSLLGPDLDGDGDSDADDMSNDDDS
VSDLDDDEDDGDFIMDGGGGILEIVTDGDEDDDDSQLIESYTSDDEDDFVGNAFGY
NT seq
5931 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagccatgaatgaccaagcgaaccaaggtgaagacgaagaagctcagcctcct
caaccaccacctgtatcggaatctcagcctcagtctcaagcagaagaagaagaagacgac
gaggaagaagaagaagaagaggaaccgagaaatgaagacgacgagttgatcgccaaggct
cagaagcttatggagaagatcacttcctcgcctgaaaaccctagctcctccgcactccat
gccctagcctccctcctcgaaactcaagaatcgcgatacatggaagagaatggtcattcc
cctaataatattcgtgcttcacataacattggacggcttggaagcttagtccgggaaaac
gatgacttcttcgagttgatatcttcaaagtttctatcagaagcaagatacccaccctcc
atccaggcagctgcttcaaggcttcttctaagctgctcgctgacttggatttatcctcat
gtttttgaagaagccgttttggagaacataaaaaattgggtgattgatgatgcttccaga
attcctagtgttgatcacaaatgcccagattatgaaatgttgaaaacctattctactgga
cttcttgctgtatctttggcaggtggtggtcaggtagtagtagaagatgtgttgacatct
ggattgtctgccaagcttatgcgctatcttcgtgtgcgtgtccttggggagacaaataca
agccagaaagatgctaatcatttaacagagaataagactgcatctgctgctattatcata
agaggcagggacgaaggccggggtagggtaaggcaggttctggaaacaacttatttagat
gatctgaggggggctgaggagagatccatagatgaccaatgtgttgaaagggatcaggat
agaagcattgtttggcaaggacgtggagaagaatgctgggtgaatgatggtgaaccaccc
aatgccttggatgaagagactgattcatatgtggcagatgccgatggtgaggacagatgg
catagtcgagatttgcgtgatgggaagaataaatttggggattttgatgaaaatacaagg
gatgactccttaaggcgcagaacaaaccgtgggttgagatccagaagcaagggaagggtt
aatgaaggtgctctagagaatgaacagcttttaacctcaccaggatctggtagtcgacta
ggacaggggcggagcacaatgaggagtttttcaagacatttagacataaaaaaagtacca
gatgctagaaagtcttatggcaggatcacatctgatgctgtgcctgtcgaaagagaggat
aatgatgactgctatcaagaatgtagcattggatctaaagatatatctgatctcgtaaag
aaggcagttagagccgctgaagctgaagcgagagcagccgatgcacctgcagaggctatc
aaagcagctggcgatgctgccgctgaagtagtcaaaagtgcggcttttgaggaatttaaa
aatacaaacaatgaagaagctgctgttttggctgcttccagagctgcatccaccgttgta
gatgctggaaatgcacttgaagtttcaagaagctctattactgtcaaggatgacacgatg
attcaaggcgggcctgaagcagaaaccagtgaggatgttgaagaatatttcatcccggac
tctgaatctctggcacagtcgagagaaaaatactgtattcagtgtctagagatacttgga
gaatatgttgaagttcttggacctgtactgcacgaaaagggggttgatgtctgtcttgca
ctgttgcaacggagttccaaacacaaggaggcatcaaagattgcaatcttgcttgatata
atgaagctaatctgtgcactagctgctcacaggaaatttgctgcattatttgttgatcgg
ggtggcatgcagaaacttcttgctgtccctagagttgctcaaaccttcctcggtctttct
tcctgcttatttagtattggttctctgcagggaataatggaacgtgtatgtgctcttccc
tcagatattgtacaccaggtggttgagttagctatccaacttcttgagtgctcccaggat
caagctagaaaaaatgctgccttgttttttgctgccgcatttgtcttccgagcagtactt
gatgcctttgatgctcaggatggtttgcagaaattactcatcctgttaaatgatgctgcc
tcagtaagatctggagtaaatactggagcattaggcttgtccagttcaggatcatttcga
aatgatcgttcatctgcagaagtactgacatcatcagagaagcagatagcgtaccacact
tgtgttgctctgcggcaatattttagagctcatctccttttgcttgtggaatccattcgt
ccaaataaaagcaatcgaattgcagcccgcaatatatcaagtataagggcagcctacaag
ccacttgacatcagtaatgaagctttggatgcagtccttctgcagctacagaaggatcgg
aagctgggtccagcatttgtaagaactcgctggcctgctgttgagaagttcttaagttct
aatggacatattacgttgttggaattgtgtcaggccccacctgtcgagcgttatttgcac
gacttgctccaatatgcattgggtgttttgcatattgttacattagtacccaatacccgc
aagatgattgtaagtgccacattaagcaataaccgcgttggtatagcagtcattttggat
gcggcaaatagtgctagtagttatgtggacccagagatcattcaaccagcactaaatgta
ttagtcaatcttgtttgtccaccaccttcaatcagcaataaaccgcctctacttgcacaa
ggccagcattctgtttccgcccaaacctcaattggtcctgccattgagactagagatagg
aacacagaacgtaatatctcagatcgagctgttaacagttccagccagagtgatcaaagg
gaccggaatggggactccagtgtggtagatagaggcagtgctgcaggtggtacacagtct
gtcagtggcacttcacaaactcctgttgccccggccacttcaggacttgttggagatcgt
agaatatctttaggtgctggagcaggttgtgctggccttgctacacaattggagcttgga
tatcgtcaagcaagagaggcagtacgtgccaacaatggcataaaggttcttctccatcta
ctccaaccacgcatatattcacctcctgctgctcttgattgtcttcgtgctcttgtatgc
cgagtccttcttggtctagccagggatgatgctattgcgcacatactgacaaagcttcag
gttgggaaaaagctatcagaactaattcgagattcgggcagccagacaactggaaccgag
caaggcaggtggcaagctgaactttcccaggcagcaattgagctgattgcaattgtgaca
aattcagggcgtgcaagtactttagcagccactgatgctgctacacctactttgaggcgt
atagaaagagcagctattgctgctgctactcctattacttaccattccagggaactttta
cttctaatccatgaacacctacaggcgtctggtttgggttcaactgctgctgcattgtta
aaagaggctcagttgacgcctttgccatccttggcagctccatcatctctcacacaccag
tcctcttcacaggaagccccttctatgcaactccagtggccctctggtcgtgctcctagt
ggattttttacagaaaaatctaaacctgctgcacgggatgaggatacaggcttaaagtat
gattcaactatattttcttcaaagaaaaaaccactagctttctcgcccagttttggtttt
cagtcaaaaaatcagttgctatcccatgattctcactcagcatctgtcaggaaaatcttc
atgacttcaaaacaatcttctgaacatgcaattgtatcagaaaccccggctagatcagaa
actccatcagagtcattgccaaaccctaattttgatgcagagtcccagtataagactcca
attgtattgccaatgaagcgcaaattatcagagctaaaggatattgggtcattttcattc
tctggaaagcgatttcatgcaagtgagcaaggacttcggtctccagtttttccaacaccc
aatacttttcgtaaaagcaatctactagttgataccattgggctttcttcaccaagttct
aacctaagagatcagcatgggcgatcaacaccaagtagttgtttgggtgattatgtggat
gacagcccatatactaacatccatacgggtcaggtgacaccgttcccacaacttgggctt
ttaaatgatcctcaagccatcagcacagagcgtttaactctagactctcttgttgttcaa
tatctgaagcatcagcatcgccaatgccctgcccccataaccactcttccaccactctct
ctcttacatccacatgtttgtcctgaaccaaaaagaagccttgaagccccatccaatgta
acagcccgacttggtacacgtgagtttagaagtatgtatggtggggtacatggaaatcgc
agagatcgtcagtttgtttacagcagatttagaccatggagaacttgtagggatgatgtt
gtttctcttttgacgtgcattaattttcttggagactcatcccgttttgcagttggcacc
cacactggagagctcaaaatttttgactccaacagcaacaatgtgctggagagctgcata
agccatcagtctcctatgacatttattgagtcatatctttctggtgagacgcagttggtg
ctttcttcaagctcccaagatgtaaggttgtgggatgcatcttcaatctcaggtgggcca
atgcatccatttgaagggtgtaaggcggcaaggtttagcaatgctggaaacatttttgca
gccctatcatcagaacctggacgacgggaaattttcctgtatgatattcagaccttccag
ttggaattgaaactatcggacacgtatgccagttctacaggtcgggggcatatttattct
cccatccatttcagcccttcagatgccatgctgctatggaatggggtcctgtgggatcga
cgggttcctacccctgttcatcgctttgatcaatttacagattatggaggtggtggtttt
catccagctgggaatgaggtaattataaactctgaggtctgggatctccggaagtttagg
ctcctccgaagcgtaccatctttagaccaaacaatgataacatttaatgcacgcggtgat
gtaatttatgcaatccttaggagaaatcttgaggatgcaatgtcagcagttcacacacgt
cgatccaagcatcccctctttgctgcattccgcacagtagatgcagtcaactactccgac
attgccactattccagtggatcgttgtgtcctcgactttgcaacagaaccaacagattcc
tttgtagggttgattacaatggatgaccaagaagagatgatttcttctgctagggtttat
gaaatcggtcgccgaaggtcaaccgatgatgattctgatcccgatgatgctgagagtgag
gaggaagatgaggatgatgatgatgacgatgatgatggtgatatggacagcttactgggt
ccagatcttgatggggatggtgatagtgatgctgatgatatgagcaatgatgatgatagt
gtaagtgatcttgacgacgatgaagatgatggggatttcatcatggatggcggaggagga
atactggagattgtgaccgatggtgatgaggatgatgatgatagtcaactgatagaatct
tatactagtgacgatgaggatgattttgtgggcaacgcatttggttactaa
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integrated database retrieval system
