Quercus lobata (valley oak): 115972083
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Entry
115972083 CDS
T07350
Name
(RefSeq) RNA-binding protein BRN1 isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qlo03041
]
115972083
Spliceosome [BR:
qlo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
115972083
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
115972083
NCBI-ProteinID:
XP_030948091
UniProt:
A0A7N2REL0
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Position
12:complement(23825490..23830840)
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AA seq
432 aa
AA seq
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MAEGKRERRESSSEESVKLFVGQVPKNMTEVQLLTMFREFALVDEVNIIKDKTTRASRGC
CFVICPTREEADKAVNACHNKKTLSGASSPLQVKYADGELERLEHKLFVGMLPKNVSEAE
VSALFSTYGTIKDLQILRGSQQTSKGCAFLKYETKEQAIAALDAINGKHKMEGSSVPLVV
KWADTEKERQARRAQKAQSQASNVPNTDSQHPSLFGALPLGYVPPYNGFGYQAPGYGLMQ
YRLPPMQNQPGFHSMIPTVNQGNALRGIAPDLGPSMNPRNYAIPPASYMGSTYHLQHPLA
YPGGMFSHRPLSSSPRSVPPAVLSSNSATSSSTGKGSGGQVEGPPGANLFIYHIPQEYGD
QELSTAFQGFGRVLSAKVFVDKATGVSKCFGFVSYDSPEDAQSAISMMNGFQLGGKKLKV
QLKRDNKQTKPC
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggggaagagagagagaagagagagtagcagcgaagagagcgtgaagctattc
gtgggtcaagtaccgaagaacatgacggaggttcagcttctcacaatgttcagagagttt
gctctcgtcgacgaggtcaacatcatcaaagacaaaaccacgcgcgcctcgcgtggttgt
tgctttgtgatttgtccgacgagggaagaggcagacaaggcagtcaatgcgtgtcacaac
aagaaaactctatctggggcatctagcccgttgcaagtgaagtatgctgatggcgagttg
gaaagactagaacacaagctcttcgtcggcatgcttccaaagaatgtttctgaagctgaa
gtttctgctctcttctctacatacggaactataaaggacttacagatattacgaggctct
cagcaaactagtaaaggatgtgcatttttgaagtatgagacaaaagaacaagccattgca
gccttggatgccatcaatggaaagcataaaatggagggatctagtgttcctttggttgtc
aagtgggcagatactgaaaaggaaaggcaagctcggagggctcagaaagctcaatctcag
gcttctaatgtgccaaatactgattcacaacatccttcattatttggagctttaccattg
ggttatgttcccccatataatggatttggttatcaggctcccggatatggactgatgcaa
tatcgcttgccaccaatgcagaatcaacctggatttcatagtatgattcctacggtaaac
caaggaaatgcattgcgtggaattgcacctgaccttggccccagtatgaaccctagaaat
tatgcaatccctcctgctagttatatgggatctacttatcatcttcagcatcccctggca
tatcctggaggaatgttcagccatcggcctttgagtagttcacctcggtcagtgccacct
gcagttttaagcagtaactctgcaacatcttccagcacaggaaaaggttctgggggtcag
gttgaaggtccacctggcgctaatctatttatttatcacatacctcaagaatatggagat
caagaactttcaactgcttttcagggatttggtagggtcttgagtgctaaggtttttgtt
gacaaagcaactggtgttagcaaatgttttggatttgttagctatgactcaccagaggat
gctcaatccgctattagcatgatgaatggatttcaattaggtggcaagaaattaaaggtt
caactaaagagagataacaaacagactaaaccttgttga
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