Quercus lobata (valley oak): 115972130
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Entry
115972130 CDS
T07350
Name
(RefSeq) methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial isoform X1
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo00280
Valine, leucine and isoleucine degradation
qlo01100
Metabolic pathways
Module
qlo_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
115972130
Enzymes [BR:
qlo01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
115972130
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Gene cluster
GFIT
Motif
Pfam:
MCCA_BT
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
HlyD_3
HlyD_D23
ATPgrasp_ST
ATP-grasp_4
ATP-grasp_3
ATPgrasp_TupA
QRPTase_N
DUF2118
RnfC_N
Motif
Other DBs
NCBI-GeneID:
115972130
NCBI-ProteinID:
XP_030948150
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Position
12:20695074..20706924
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AA seq
741 aa
AA seq
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MASMASLLHRKLQHQHNHKPFFFFFFQSRLFSDSASSSSQSIEKILVANRGEIACRIMRT
AKRLGIRTVAVYSDADRDALHVKSADEAVLIGPPPARLSYLNASSIVDAAFRTGAQAIHP
GYGFLSESADFAQICEHRGLKFIGPPASAIRDMGDKSASKRIMGAARVPLVPGYHGNEQD
IDLMKLEADKIGYPIIIKPTHGGGGKGMRIVNSPNEFVESFLGAQREAAASFGINTILLE
KYITQPRHIEVQIFGDKHGNVLHLYERDCSVQRRHQKIIEEAPAPNISIDFRSHLGQAAV
SAAKAVGYHNAGTVEFIVDTTSGQFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGE
ALPMSQSQVPLSGHAFEARIYAENVAKGFLPATGVLHHYRLVPVSSTVRVETGVEQGDTV
SMHYDPMIAKLVVWGENRAAALVKLKDCLSKFQVAGLPTNINFLQKLVKHWAFENGDVET
HFIEHFKDDLFVSPTNAVSAKEAHEAARFNAALVAACVISMEHSLSKENSPAGNNSLSIW
YSSPPFRVHHCARHTMEIEWENEYDSAGSNVLTLSITYKPNGNYLIETGENCSPGFEVKA
THLGNHDFRVEADGVSMDVSLAVYFKDQTKHIHIWCGSHHHQFRQKIGRELSGDDEAQHK
PSFDTASHPQGTVVAPMAGLVVKVLVKDGTKVEEGQPILVLEAMKMEHVVKAPCTGCVHG
LVVTAGQQVSDGSVLFSVKDQ
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctatggcttcccttctccatcgaaagctccaacaccaacacaatcacaaacct
ttcttcttcttcttcttccaatcacgcttattctccgactctgcttcttcttcttcacag
agcatagagaaaattctcgtggcgaacagaggcgaaatcgcttgccgaatcatgaggacc
gcgaagaggctagggattcggaccgtcgcggtgtacagcgacgcagaccgcgacgcgctt
catgtcaaatcggccgacgaggccgtccttatcggtcctccaccggctcggttgagttac
ctcaacgcgtcgtcgattgtcgacgctgcgtttcgcactggtgcgcaggctatccaccct
ggctatggtttcttatcggagagtgctgattttgctcaaatttgtgagcatagaggtctt
aaatttatcggccctccagcatctgcaatccgtgacatgggtgataaaagtgcatcaaag
agaataatgggtgctgccagggtaccacttgtgcctggatatcatggcaatgaacaagat
atagatctgatgaagttagaagcagacaagattgggtacccaatcataataaaaccaact
catggaggaggaggaaagggtatgaggattgtaaacagtccaaatgaatttgttgaatct
ttcttgggagcacaacgtgaggctgctgcttcttttggcataaacacaatattgctggag
aaatatatcacacagccaaggcacatagaagttcagatatttggggacaaacacgggaat
gttcttcatttatatgaaagggattgcagtgtgcagagaagacaccagaagataattgaa
gaagctccagctccaaatatttccattgattttcgctcccacttgggtcaagctgctgtt
tctgcggccaaggcagttggatatcacaatgctggcactgtggagtttatagttgacaca
acctcaggccaattttattttatggagatgaacacccgtcttcaggttgagcatcctgtg
actgagatgattgttggtcaagatcttgtagagtggcaaatccgtgttgcaaatggagaa
gctcttcccatgagtcagtcacaggtgccgttatcaggtcatgctttcgaagcccgaata
tatgctgaaaatgtagcgaaaggttttcttcctgcaactggagttcttcatcattatcgt
cttgttccagtgtcatcaacagttcgggttgagactggggttgaacaaggagacactgtt
agcatgcattatgatcctatgattgctaagcttgtagtatggggagaaaatcgtgctgca
gcattagtaaaattaaaggattgcctctcaaagtttcaggttgcaggtttaccaaccaat
atcaatttcctccaaaaacttgtgaaacattgggcatttgagaacggcgatgtagaaact
catttcattgaacactttaaagatgatctctttgtttctcctacgaatgcagtatcagca
aaagaagcacatgaagctgctagatttaatgcggccctagtagctgcatgtgttatctca
atggaacattctctatcgaaagaaaattcccctgcaggcaacaactcactctccatatgg
tattcgtccccacctttcagagttcatcattgtgctaggcatacaatggaaattgaatgg
gagaatgaatatgatagcgctggttcaaatgtccttacactctctattacttataagcca
aatggaaactatctgattgagacaggagaaaattgctcccctggttttgaagtcaaagca
acacatctaggtaaccatgatttcagagttgaagcagatggtgtaagcatggatgtcagt
ttagctgtttacttcaaggatcaaacaaagcacatacacatatggtgtgggtcacatcat
catcaattcagacagaaaataggacgtgagttgtctggtgatgatgaagcccaacataag
cccagttttgatacagcatcccacccccagggaactgttgtggcccccatggctggttta
gtagtcaaagttctggtgaaggacgggacaaaagtggaggaagggcaacccatattagtc
ttggaggcaatgaagatggagcatgttgtaaaggcaccatgtactgggtgtgtccatggg
cttgtagttacagctggccagcaagtttctgatggtagtgttctcttcagtgtcaaggat
cagtag
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