Quercus lobata (valley oak): 115972260
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Entry
115972260 CDS
T07350
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.6
KO
K14487
auxin responsive GH3 gene family
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
115972260
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Motif
Pfam:
GH3
GH3_M
GH3_C
Motif
Other DBs
NCBI-GeneID:
115972260
NCBI-ProteinID:
XP_030948333
UniProt:
A0A7N2N407
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Position
12:23062854..23066163
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AA seq
585 aa
AA seq
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MNPTDDEEILKKLEDSTKDATGRQLEALRSILEHQSKGGGVRYLRPYLQGYDAPVDANSF
RQAVPLSSYEDYVDHINQMANNGPVDHDQPEPLLSVDPLICFFYSSGASTMKPKLIPYFD
SKLSRAASFIAHQGSNAIHRRLFPPRPSVNKVLWFIYADNITTTKGGFKVMAASSYPMHG
SKANWSQLVSCSSPREVILGSNIEHQMYCHLLCGLRNSDSLDGIRAPYAISLINVFSLLE
SRWEQLCDDLEHGVPSSKISDVVMKDSVTEVLGGPQPELSRRIRVICEDKNWGGIVYKLW
PNVRYIRCVTTGSMKQYYPRLKHYAGEVPLLGGDYFASECCVGINLDIMQPPETTQFVLL
PTAAYFEFLPFALDEINVGEETVDISGVEVGKMYEVVVTTYRGFYRYRLGDIVRVVDFYN
SAPQVEYVMRAPNTSSEIITEKHLMSAMESFQRVIRKDMAAEISEFASFLDLMLSPKLLK
LYIEVREGCKLLQEEKLEESVEILKRCGSSIEDSLGGIYMVQRKRGELGPLAVSIVKPGS
FDRLSSVAIENGAPASQYKPPKIIRNRQIVDFMERCIVVTVSLDG
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgaccgacgacgaggagatcctgaagaagctggaggactcaaccaaggatgcc
actggtcgacagctcgaggccctaaggtccatcctcgaacaccaaagcaaaggcggcggc
gtacgttatctccgaccttacctccaaggctacgatgcgccggttgatgcaaattcgttc
cgccaagctgtgccgttgtcttcctacgaggactacgttgaccacatcaatcagatggcc
aacaatggacccgttgaccatgatcagcctgagcctctcctgtccgttgatcctctcatc
tgtttcttctacagctcaggagcaagtaccatgaagcccaaattgatcccttactttgat
tcaaagctctcgagagccgcctcgttcatagctcaccagggcagcaatgcaattcatcgg
aggttatttcctcctaggccatctgtgaataaggtcctatggtttatttatgccgataat
ataacaactaccaaaggcggttttaaggttatggctgcttcttcatatcctatgcatggc
agtaaggcgaactggtctcagttggtctcttgttcaagcccccgggaagtcattcttggg
tcaaacatagagcaccagatgtattgccacctactttgtggccttagaaactctgattct
cttgatgggattcgtgccccatatgccataagcttgatcaatgtgtttagtcttttagag
tccaggtgggagcagctatgtgatgatcttgaacatggggtcccaagttcaaagatttcc
gatgttgtgatgaaagattctgttactgaagttcttgggggccctcaaccagaattgtca
aggagaattcgggtgatttgtgaggacaagaattggggtgggatagtgtataaattgtgg
cctaatgtgcggtacattaggtgtgttaccacagggagtatgaagcagtattatccaagg
cttaagcactatgcaggagaggtacctttgttaggtggagactactttgcttcagaatgc
tgtgtgggtatcaacttggatattatgcagcctcccgagacaacccaattcgtgttgctt
ccaactgcagcttactttgagtttcttccatttgctttggatgagatcaatgttggtgaa
gaaacagtggacatttctggtgtggaggtaggaaagatgtatgaagtggttgtcactaca
tatagaggattctaccgatatcgtttaggtgatattgtgagagttgttgatttctataat
tctgctccacaagtggagtatgtgatgagagctcctaatacttcgtccgagataataact
gagaaacatttgatgtctgccatggaaagttttcaaagggtcatcagaaaagatatggca
gcagagatttcagagtttgcaagtttcttggacttaatgttgagcccaaagcttttgaag
ctttatatagaagttagagagggatgtaagcttttgcaggaagagaagctagaggagtca
gttgaaattctcaagaggtgtggttcctctattgaggatagcttgggaggcatttacatg
gtgcagaggaaaagaggcgaattaggtcctttggcagtatccattgtaaagccaggtagc
tttgatagattatcatcggtagccattgagaatggagcaccagctagtcaatataaacca
cccaagattataagaaatcgccaaattgttgacttcatggaaagatgtattgttgttact
gtatctttggatggttaa
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